Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE3BQ7Z3V4 AP003680.1-201ENST00000598970 3660 ntBASIC19.77■□□□□ 0.75
UBE3BQ7Z3V4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 TTTY23B-201ENST00000442790 549 ntBASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 AL033527.5-201ENST00000641382 801 ntBASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE3BQ7Z3V4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 CYP2T1P-202ENST00000641596 2535 ntBASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AC244107.1-201ENST00000442033 332 ntBASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE3BQ7Z3V4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 AC024909.3-201ENST00000611513 2257 ntBASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 BRI3BPP1-201ENST00000594224 787 ntBASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
UBE3BQ7Z3V4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms