Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 FAM86MP-201ENST00000340703 885 ntBASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 AC092933.1-201ENST00000393644 945 ntBASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHROOM1Q2M3G4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 SOCS2P1-201ENST00000417727 557 ntBASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 AC093433.1-201ENST00000458048 571 ntBASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SHROOM1Q2M3G4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 MIR648-201ENST00000385046 94 ntBASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 FTH1P14-201ENST00000482930 551 ntBASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AL583810.1-201ENST00000553344 1045 ntBASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHROOM1Q2M3G4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 DRD5P1-201ENST00000456605 1438 ntBASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.41■□□□□ 0.54
SHROOM1Q2M3G4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms