Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.18□□□□□ -0.62
PRKDCP78527 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC11.18□□□□□ -0.62
PRKDCP78527 DUT-207ENST00000559416 635 ntTSL 2 BASIC11.18□□□□□ -0.62
PRKDCP78527 AC006548.2-201ENST00000605217 529 ntBASIC11.18□□□□□ -0.62
PRKDCP78527 NAP1L6-202ENST00000641404 1222 ntBASIC11.18□□□□□ -0.62
PRKDCP78527 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.18□□□□□ -0.62
PRKDCP78527 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.18□□□□□ -0.62
PRKDCP78527 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.18□□□□□ -0.62
PRKDCP78527 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC11.18□□□□□ -0.62
PRKDCP78527 MIR3677-201ENST00000578964 60 ntBASIC11.18□□□□□ -0.62
PRKDCP78527 AL132994.2-201ENST00000603120 687 ntBASIC11.18□□□□□ -0.62
PRKDCP78527 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.18□□□□□ -0.62
PRKDCP78527 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
PRKDCP78527 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
PRKDCP78527 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.18□□□□□ -0.62
PRKDCP78527 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 RPL7P35-201ENST00000446943 740 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 UBALD1-205ENST00000590891 2641 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 AC134407.2-201ENST00000625089 1978 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 AL627231.1-201ENST00000394467 1125 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 AL157791.1-201ENST00000553667 1699 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PRKDCP78527 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.17□□□□□ -0.62
PRKDCP78527 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
PRKDCP78527 AC005052.1-201ENST00000625181 2492 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PRKDCP78527 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PRKDCP78527 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.17□□□□□ -0.62
PRKDCP78527 AC020916.1-201ENST00000587762 1774 ntBASIC11.17□□□□□ -0.62
PRKDCP78527 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 BUD31-205ENST00000456893 512 ntTSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 AC107464.3-201ENST00000609172 737 ntBASIC11.16□□□□□ -0.62
PRKDCP78527 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.16□□□□□ -0.62
PRKDCP78527 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PRKDCP78527 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 POM121L8P-201ENST00000417732 1281 ntBASIC11.16□□□□□ -0.62
PRKDCP78527 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC11.16□□□□□ -0.62
PRKDCP78527 HLA-DPA2-205ENST00000433582 733 ntBASIC11.16□□□□□ -0.62
PRKDCP78527 POM121L9P-203ENST00000441984 1285 ntBASIC11.16□□□□□ -0.62
PRKDCP78527 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC11.16□□□□□ -0.62
PRKDCP78527 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.16□□□□□ -0.62
PRKDCP78527 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PRKDCP78527 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PRKDCP78527 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms