Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
HDGFP51858 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HDGFP51858 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HDGFP51858 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.26■■□□□ 1.15
HDGFP51858 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC22.26■■□□□ 1.15
HDGFP51858 AL590640.2-201ENST00000457038 527 ntBASIC22.26■■□□□ 1.15
HDGFP51858 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 RN7SL769P-201ENST00000469386 295 ntBASIC22.26■■□□□ 1.15
HDGFP51858 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC22.26■■□□□ 1.15
HDGFP51858 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC22.26■■□□□ 1.15
HDGFP51858 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC22.26■■□□□ 1.15
HDGFP51858 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.26■■□□□ 1.15
HDGFP51858 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
HDGFP51858 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HDGFP51858 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
HDGFP51858 ME2P1-201ENST00000426028 1970 ntBASIC22.25■■□□□ 1.15
HDGFP51858 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.25■■□□□ 1.15
HDGFP51858 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 RAC2-202ENST00000401529 569 ntTSL 4 BASIC22.25■■□□□ 1.15
HDGFP51858 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 CNN2P10-201ENST00000443067 918 ntBASIC22.25■■□□□ 1.15
HDGFP51858 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.25■■□□□ 1.15
HDGFP51858 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
HDGFP51858 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.25■■□□□ 1.15
HDGFP51858 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HDGFP51858 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
HDGFP51858 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 AL354989.2-201ENST00000435838 1540 ntBASIC22.25■■□□□ 1.15
HDGFP51858 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
HDGFP51858 AP001094.4-201ENST00000579008 2176 ntBASIC22.25■■□□□ 1.15
HDGFP51858 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HDGFP51858 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HDGFP51858 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
HDGFP51858 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC22.24■■□□□ 1.15
HDGFP51858 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.24■■□□□ 1.15
HDGFP51858 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 KLF2P2-201ENST00000416807 1039 ntBASIC22.24■■□□□ 1.15
HDGFP51858 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
HDGFP51858 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC22.24■■□□□ 1.15
HDGFP51858 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC22.24■■□□□ 1.15
HDGFP51858 HIST2H2BC-201ENST00000498492 580 ntBASIC22.24■■□□□ 1.15
HDGFP51858 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC22.24■■□□□ 1.15
HDGFP51858 TBCB-211ENST00000589996 724 ntTSL 3 BASIC22.24■■□□□ 1.15
HDGFP51858 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC22.24■■□□□ 1.15
HDGFP51858 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.24■■□□□ 1.15
HDGFP51858 NDUFV2P1-201ENST00000596415 907 ntBASIC22.24■■□□□ 1.15
HDGFP51858 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HDGFP51858 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC22.24■■□□□ 1.15
HDGFP51858 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC22.23■■□□□ 1.15
HDGFP51858 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HDGFP51858 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC22.23■■□□□ 1.15
HDGFP51858 AL133373.2-201ENST00000623187 2828 ntBASIC22.23■■□□□ 1.15
HDGFP51858 AC007613.1-201ENST00000572811 2597 ntBASIC22.23■■□□□ 1.15
HDGFP51858 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HDGFP51858 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HDGFP51858 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
HDGFP51858 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC22.23■■□□□ 1.15
HDGFP51858 AC105129.2-201ENST00000559536 390 ntBASIC22.23■■□□□ 1.15
HDGFP51858 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC22.23■■□□□ 1.15
HDGFP51858 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
HDGFP51858 AC138627.1-207ENST00000641560 1006 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms