Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.9■□□□□ 0.46
ACTN4O43707 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ACTN4O43707 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ACTN4O43707 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.89■□□□□ 0.45
ACTN4O43707 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.89■□□□□ 0.45
ACTN4O43707 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.89■□□□□ 0.45
ACTN4O43707 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.89■□□□□ 0.45
ACTN4O43707 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 BANF1P1-201ENST00000553684 263 ntBASIC17.89■□□□□ 0.45
ACTN4O43707 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.89■□□□□ 0.45
ACTN4O43707 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.89■□□□□ 0.45
ACTN4O43707 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 AL450472.2-201ENST00000603663 1156 ntBASIC17.89■□□□□ 0.45
ACTN4O43707 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.89■□□□□ 0.45
ACTN4O43707 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.89■□□□□ 0.45
ACTN4O43707 TNRC18P2-201ENST00000417666 2714 ntBASIC17.89■□□□□ 0.45
ACTN4O43707 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.89■□□□□ 0.45
ACTN4O43707 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.89■□□□□ 0.45
ACTN4O43707 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ACTN4O43707 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.88■□□□□ 0.45
ACTN4O43707 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.88■□□□□ 0.45
ACTN4O43707 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
ACTN4O43707 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
ACTN4O43707 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.88■□□□□ 0.45
ACTN4O43707 FAM58DP-201ENST00000428076 619 ntBASIC17.88■□□□□ 0.45
ACTN4O43707 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 AC093520.2-201ENST00000561830 333 ntBASIC17.88■□□□□ 0.45
ACTN4O43707 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.88■□□□□ 0.45
ACTN4O43707 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
ACTN4O43707 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 AC097359.3-201ENST00000603982 1210 ntBASIC17.88■□□□□ 0.45
ACTN4O43707 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ACTN4O43707 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 AC127383.1-201ENST00000444697 1800 ntBASIC17.88■□□□□ 0.45
ACTN4O43707 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.88■□□□□ 0.45
ACTN4O43707 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.88■□□□□ 0.45
ACTN4O43707 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ACTN4O43707 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
ACTN4O43707 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ACTN4O43707 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ACTN4O43707 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms