Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 KRT18P58-201ENST00000527480 1120 ntBASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 AC010654.1-201ENST00000615722 808 ntBASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 AC092919.2-201ENST00000623631 1645 ntBASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
AP4B1Q9Y6B7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 SNX33P1-201ENST00000592116 1762 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 MIR648-201ENST00000385046 94 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 CRYGEP-201ENST00000412192 528 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AP000347.1-202ENST00000435868 847 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 MIR4751-201ENST00000578027 74 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AC027601.4-201ENST00000611259 610 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 FAM197Y3-203ENST00000618346 717 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AC004790.2-201ENST00000623588 572 ntBASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4B1Q9Y6B7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 MIR574-201ENST00000385209 96 ntBASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 VN2R19P-201ENST00000442399 1052 ntBASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
AP4B1Q9Y6B7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms