Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 EGFEM1P-202ENST00000431685 1563 ntBASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFAF3Q9BU61 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 AL031284.1-201ENST00000419297 478 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 ABCD1P5-201ENST00000445663 754 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 BX640515.1-201ENST00000617215 977 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 TP73-AS1-207ENST00000624167 988 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFAF3Q9BU61 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 AC009336.1-201ENST00000608941 1553 ntBASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFAF3Q9BU61 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.45□□□□□ -0.42
NDUFAF3Q9BU61 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms