Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC068587.10-201ENST00000641210 219 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 ALOX12P2-203ENST00000570921 1945 ntBASIC18.66■□□□□ 0.58
TRIM47Q96LD4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM47Q96LD4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 AC092337.1-201ENST00000568699 1129 ntBASIC18.65■□□□□ 0.58
TRIM47Q96LD4 MIR6069-201ENST00000620069 79 ntBASIC18.65■□□□□ 0.58
TRIM47Q96LD4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM47Q96LD4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM47Q96LD4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.64■□□□□ 0.58
TRIM47Q96LD4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM47Q96LD4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM47Q96LD4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.64■□□□□ 0.58
TRIM47Q96LD4 AC006538.1-201ENST00000567905 1585 ntBASIC18.64■□□□□ 0.58
TRIM47Q96LD4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.64■□□□□ 0.58
TRIM47Q96LD4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 BCYRN1-201ENST00000418539 200 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 USP32P1-208ENST00000506594 1164 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 RRP7BP-205ENST00000566851 833 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 AC024267.1-201ENST00000582320 895 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 AC010319.3-201ENST00000597028 470 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 AC026979.3-201ENST00000607315 403 ntBASIC18.64■□□□□ 0.57
TRIM47Q96LD4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM47Q96LD4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 AC006277.1-201ENST00000624348 1610 ntBASIC18.63■□□□□ 0.57
TRIM47Q96LD4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM47Q96LD4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms