Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
UBR1Q8IWV7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBR1Q8IWV7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBR1Q8IWV7 AC006449.6-201ENST00000612330 2296 ntBASIC22.1■■□□□ 1.13
UBR1Q8IWV7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.1■■□□□ 1.13
UBR1Q8IWV7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 KRT8P4-201ENST00000509735 1454 ntBASIC22.09■■□□□ 1.13
UBR1Q8IWV7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AC005740.2-201ENST00000511085 419 ntBASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AC106886.4-201ENST00000623557 2502 ntBASIC22.09■■□□□ 1.13
UBR1Q8IWV7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AL160314.3-201ENST00000556041 767 ntBASIC22.09■■□□□ 1.13
UBR1Q8IWV7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC22.09■■□□□ 1.13
UBR1Q8IWV7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBR1Q8IWV7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 RNMTL1P1-201ENST00000454103 560 ntBASIC22.08■■□□□ 1.12
UBR1Q8IWV7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 PCBP2-OT1-201ENST00000634357 590 ntBASIC22.08■■□□□ 1.12
UBR1Q8IWV7 AC068587.8-201ENST00000641239 219 ntBASIC22.08■■□□□ 1.12
UBR1Q8IWV7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC22.08■■□□□ 1.12
UBR1Q8IWV7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 AL023803.2-201ENST00000620080 638 ntBASIC22.07■■□□□ 1.12
UBR1Q8IWV7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBR1Q8IWV7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 AL645937.2-201ENST00000396808 931 ntBASIC22.06■■□□□ 1.12
UBR1Q8IWV7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms