Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AC005034.1-201ENST00000426657 489 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 MYCLP2-201ENST00000449268 967 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 GAPDHP21-201ENST00000450301 1010 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 WASH4P-201ENST00000564273 1246 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AL035252.4-201ENST00000624174 288 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 AC084018.2-201ENST00000613093 2607 ntBASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DCAF4L1Q3SXM0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AC138969.3-201ENST00000546612 1459 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AC138932.2-201ENST00000548268 1459 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AC126755.4-201ENST00000549796 1459 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 DGCR5-201ENST00000399539 862 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AP006294.1-201ENST00000415407 339 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 COX5BP8-201ENST00000416911 349 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 KRT18P64-201ENST00000434946 1219 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AC104596.2-201ENST00000512793 793 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 CR383656.12-201ENST00000549567 513 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 CU639417.3-201ENST00000624240 1404 ntBASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.19■□□□□ 0.34
DCAF4L1Q3SXM0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 NME2P1-201ENST00000426182 414 ntBASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DCAF4L1Q3SXM0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms