Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 AP000974.1-201ENST00000623909 2387 ntBASIC15.97■□□□□ 0.15
NUBP1P53384 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 AL512661.1-201ENST00000434586 1253 ntBASIC15.97■□□□□ 0.15
NUBP1P53384 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NUBP1P53384 HESX1-202ENST00000473921 757 ntTSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 COX5BP1-201ENST00000507622 393 ntBASIC15.97■□□□□ 0.15
NUBP1P53384 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.97■□□□□ 0.15
NUBP1P53384 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC15.97■□□□□ 0.15
NUBP1P53384 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
NUBP1P53384 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.97■□□□□ 0.15
NUBP1P53384 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.97■□□□□ 0.15
NUBP1P53384 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NUBP1P53384 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NUBP1P53384 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 AL671710.1-201ENST00000610245 2349 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NUBP1P53384 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 RSL24D1P8-201ENST00000434442 492 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 AC114501.1-201ENST00000445949 172 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.96■□□□□ 0.15
NUBP1P53384 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC15.96■□□□□ 0.15
NUBP1P53384 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.96■□□□□ 0.15
NUBP1P53384 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.96■□□□□ 0.15
NUBP1P53384 AP005131.7-201ENST00000610087 611 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 AC006386.1-201ENST00000619436 415 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 AP003072.5-201ENST00000623872 773 ntBASIC15.96■□□□□ 0.15
NUBP1P53384 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
NUBP1P53384 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NUBP1P53384 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
NUBP1P53384 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
NUBP1P53384 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
NUBP1P53384 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NUBP1P53384 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NUBP1P53384 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NUBP1P53384 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NUBP1P53384 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NUBP1P53384 NPM1P31-201ENST00000399021 764 ntBASIC15.95■□□□□ 0.14
NUBP1P53384 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NUBP1P53384 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NUBP1P53384 EEF1DP4-201ENST00000446006 880 ntBASIC15.95■□□□□ 0.14
NUBP1P53384 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms