Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
GRIK1P39086 AL589987.1-201ENST00000453380 819 ntBASIC16.81■□□□□ 0.28
GRIK1P39086 PHKG1P2-201ENST00000457537 863 ntBASIC16.81■□□□□ 0.28
GRIK1P39086 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.81■□□□□ 0.28
GRIK1P39086 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
GRIK1P39086 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.81■□□□□ 0.28
GRIK1P39086 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.81■□□□□ 0.28
GRIK1P39086 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
GRIK1P39086 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
GRIK1P39086 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GRIK1P39086 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GRIK1P39086 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRIK1P39086 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
GRIK1P39086 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GRIK1P39086 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 DFFBP1-201ENST00000433250 979 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIK1P39086 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIK1P39086 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 AC093004.1-201ENST00000508850 424 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIK1P39086 TPRX2P-201ENST00000535362 881 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIK1P39086 SPDYE22P-201ENST00000582158 798 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GRIK1P39086 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.8■□□□□ 0.28
GRIK1P39086 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 AL450472.2-201ENST00000603663 1156 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.8■□□□□ 0.28
GRIK1P39086 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GRIK1P39086 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRIK1P39086 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.8■□□□□ 0.28
GRIK1P39086 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.8■□□□□ 0.28
GRIK1P39086 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
GRIK1P39086 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.79■□□□□ 0.28
GRIK1P39086 API5-211ENST00000534695 560 ntTSL 5 BASIC16.79■□□□□ 0.28
GRIK1P39086 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
GRIK1P39086 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIK1P39086 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.79■□□□□ 0.28
GRIK1P39086 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.79■□□□□ 0.28
GRIK1P39086 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIK1P39086 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.79■□□□□ 0.28
GRIK1P39086 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GRIK1P39086 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
GRIK1P39086 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.79■□□□□ 0.28
GRIK1P39086 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRIK1P39086 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms