Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
USP6P35125 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.19■□□□□ 0.98
USP6P35125 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP6P35125 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP6P35125 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.19■□□□□ 0.98
USP6P35125 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 AC022188.1-201ENST00000620960 1664 ntBASIC21.18■□□□□ 0.98
USP6P35125 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 AC018695.7-201ENST00000624587 2492 ntBASIC21.18■□□□□ 0.98
USP6P35125 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.18■□□□□ 0.98
USP6P35125 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 ECM1P1-201ENST00000604092 1279 ntBASIC21.18■□□□□ 0.98
USP6P35125 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 AC025181.2-201ENST00000606994 802 ntBASIC21.18■□□□□ 0.98
USP6P35125 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.18■□□□□ 0.98
USP6P35125 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.18■□□□□ 0.98
USP6P35125 AC006453.4-201ENST00000636949 1252 ntBASIC21.18■□□□□ 0.98
USP6P35125 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
USP6P35125 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP6P35125 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 AHCYP2-201ENST00000430630 1300 ntBASIC21.17■□□□□ 0.98
USP6P35125 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6P35125 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.17■□□□□ 0.98
USP6P35125 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6P35125 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
USP6P35125 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.17■□□□□ 0.98
USP6P35125 MIR4741-201ENST00000579822 90 ntBASIC21.17■□□□□ 0.98
USP6P35125 AL118558.3-201ENST00000607414 1079 ntBASIC21.17■□□□□ 0.98
USP6P35125 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 PCDHA12-202ENST00000613593 2588 ntBASIC21.17■□□□□ 0.98
USP6P35125 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6P35125 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6P35125 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.17■□□□□ 0.98
USP6P35125 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP6P35125 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.17■□□□□ 0.98
USP6P35125 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
USP6P35125 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 AC148477.4-201ENST00000613430 1793 ntBASIC21.16■□□□□ 0.98
USP6P35125 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
USP6P35125 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP6P35125 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC21.16■□□□□ 0.98
USP6P35125 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
USP6P35125 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP6P35125 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.16■□□□□ 0.98
USP6P35125 AL591846.1-201ENST00000451736 433 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms