Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AC105233.2-201ENST00000523697 349 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AF228730.5-201ENST00000530288 346 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 BX640515.1-201ENST00000617215 977 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 FAM197Y3-203ENST00000618346 717 ntBASIC17.35■□□□□ 0.37
CCDC172P0C7W6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC172P0C7W6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.34■□□□□ 0.37
CCDC172P0C7W6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC172P0C7W6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.33■□□□□ 0.37
CCDC172P0C7W6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC172P0C7W6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 GPX1P2-201ENST00000429271 606 ntBASIC17.33■□□□□ 0.36
CCDC172P0C7W6 KRT18P3-201ENST00000451602 1288 ntBASIC17.33■□□□□ 0.36
CCDC172P0C7W6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 SPTSSB-204ENST00000617024 1292 ntBASIC17.33■□□□□ 0.36
CCDC172P0C7W6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC172P0C7W6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms