Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 AL662890.1-201ENST00000396818 632 ntBASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 AC105129.2-201ENST00000559536 390 ntBASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PLEKHD1A6NEE1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CEP83-AS1-201ENST00000623122 2482 ntBASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PLEKHD1A6NEE1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 FZD10-202ENST00000539839 3282 ntBASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 HNRNPA1P32-201ENST00000396326 963 ntBASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 CNN2P10-201ENST00000443067 918 ntBASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PLEKHD1A6NEE1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 KLF2P2-201ENST00000416807 1039 ntBASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 AC114812.1-204ENST00000449669 728 ntBASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 RN7SL48P-201ENST00000579283 293 ntBASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 ECM1P1-201ENST00000604092 1279 ntBASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PLEKHD1A6NEE1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PLEKHD1A6NEE1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms