Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD8Q9HCK8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 RAP2CP1-201ENST00000605103 478 ntBASIC22.4■■□□□ 1.18
CHD8Q9HCK8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.4■■□□□ 1.18
CHD8Q9HCK8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHD8Q9HCK8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHD8Q9HCK8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.39■■□□□ 1.18
CHD8Q9HCK8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD8Q9HCK8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD8Q9HCK8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD8Q9HCK8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD8Q9HCK8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD8Q9HCK8 SNX5-217ENST00000606557 1087 ntBASIC22.38■■□□□ 1.17
CHD8Q9HCK8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD8Q9HCK8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CHD8Q9HCK8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD8Q9HCK8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD8Q9HCK8 SERBP1P1-201ENST00000396021 1160 ntBASIC22.36■■□□□ 1.17
CHD8Q9HCK8 YBX1P1-201ENST00000445822 960 ntBASIC22.36■■□□□ 1.17
CHD8Q9HCK8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.35■■□□□ 1.17
CHD8Q9HCK8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 AP002414.2-202ENST00000590929 1450 ntBASIC22.34■■□□□ 1.17
CHD8Q9HCK8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 DUX4L19-201ENST00000557448 1267 ntBASIC22.34■■□□□ 1.17
CHD8Q9HCK8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.34■■□□□ 1.17
CHD8Q9HCK8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.33■■□□□ 1.16
CHD8Q9HCK8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.33■■□□□ 1.16
CHD8Q9HCK8 AC093827.2-201ENST00000512654 315 ntBASIC22.33■■□□□ 1.16
CHD8Q9HCK8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.33■■□□□ 1.16
CHD8Q9HCK8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CHD8Q9HCK8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.32■■□□□ 1.16
CHD8Q9HCK8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 AC004448.1-201ENST00000458332 883 ntBASIC22.31■■□□□ 1.16
CHD8Q9HCK8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 AC011298.3-201ENST00000615796 283 ntBASIC22.31■■□□□ 1.16
CHD8Q9HCK8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CHD8Q9HCK8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHD8Q9HCK8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CHD8Q9HCK8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.3■■□□□ 1.16
CHD8Q9HCK8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD8Q9HCK8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.3■■□□□ 1.16
CHD8Q9HCK8 ST7-AS1-201ENST00000456775 1889 ntBASIC22.3■■□□□ 1.16
CHD8Q9HCK8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 TMEM191A-211ENST00000637163 1067 ntBASIC22.29■■□□□ 1.16
CHD8Q9HCK8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 AC099791.1-201ENST00000416440 715 ntBASIC22.29■■□□□ 1.16
CHD8Q9HCK8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD8Q9HCK8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHD8Q9HCK8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.28■■□□□ 1.16
CHD8Q9HCK8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.28■■□□□ 1.16
CHD8Q9HCK8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms