Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLIRPQ9GZT3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 AC007375.3-201ENST00000600936 2314 ntBASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 SETD8P1-201ENST00000623146 1180 ntBASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.75■□□□□ 0.91
SLIRPQ9GZT3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SLIRPQ9GZT3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLIRPQ9GZT3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
SLIRPQ9GZT3 AC127496.7-201ENST00000625110 1798 ntBASIC20.72■□□□□ 0.91
SLIRPQ9GZT3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLIRPQ9GZT3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLIRPQ9GZT3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLIRPQ9GZT3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 AC108673.1-201ENST00000510422 1159 ntBASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 CAHM-201ENST00000604200 896 ntBASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.71■□□□□ 0.91
SLIRPQ9GZT3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLIRPQ9GZT3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 MIR6090-201ENST00000622481 60 ntBASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLIRPQ9GZT3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLIRPQ9GZT3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLIRPQ9GZT3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 MIR762-201ENST00000390236 83 ntBASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms