Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
5530400C23RikQ9D3I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
5530400C23RikQ9D3I0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
5530400C23RikQ9D3I0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
5530400C23RikQ9D3I0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
5530400C23RikQ9D3I0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
5530400C23RikQ9D3I0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
5530400C23RikQ9D3I0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.74■□□□□ 0.91
5530400C23RikQ9D3I0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
5530400C23RikQ9D3I0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.73■□□□□ 0.91
5530400C23RikQ9D3I0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
5530400C23RikQ9D3I0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
5530400C23RikQ9D3I0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
5530400C23RikQ9D3I0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
5530400C23RikQ9D3I0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.7■□□□□ 0.91
5530400C23RikQ9D3I0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
5530400C23RikQ9D3I0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
5530400C23RikQ9D3I0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
5530400C23RikQ9D3I0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
5530400C23RikQ9D3I0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
5530400C23RikQ9D3I0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms