Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ska1Q9CPV1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ska1Q9CPV1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ska1Q9CPV1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ska1Q9CPV1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ska1Q9CPV1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ska1Q9CPV1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ska1Q9CPV1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ska1Q9CPV1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ska1Q9CPV1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ska1Q9CPV1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ska1Q9CPV1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ska1Q9CPV1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ska1Q9CPV1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ska1Q9CPV1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ska1Q9CPV1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ska1Q9CPV1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ska1Q9CPV1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ska1Q9CPV1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ska1Q9CPV1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.78■□□□□ 0.76
Ska1Q9CPV1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ska1Q9CPV1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ska1Q9CPV1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ska1Q9CPV1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ska1Q9CPV1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ska1Q9CPV1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ska1Q9CPV1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ska1Q9CPV1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ska1Q9CPV1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ska1Q9CPV1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ska1Q9CPV1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ska1Q9CPV1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ska1Q9CPV1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms