Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 MTQ1YNL063W 945 nt5.46□□□□□ -1.54
TDA11P38854 YBR056C-BYBR056C-B 159 nt5.46□□□□□ -1.54
TDA11P38854 PHO90YJL198W 2646 nt5.46□□□□□ -1.54
TDA11P38854 TKL1YPR074C 2043 nt5.45□□□□□ -1.54
TDA11P38854 DAK1YML070W 1755 nt5.45□□□□□ -1.54
TDA11P38854 snR32snR32 188 nt5.45□□□□□ -1.54
TDA11P38854 SMF3YLR034C 1422 nt5.45□□□□□ -1.54
TDA11P38854 STL1YDR536W 1710 nt5.45□□□□□ -1.54
TDA11P38854 OPT1YJL212C 2400 nt5.45□□□□□ -1.54
TDA11P38854 MTF2YDL044C 1323 nt5.45□□□□□ -1.54
TDA11P38854 HES1YOR237W 1305 nt5.45□□□□□ -1.54
TDA11P38854 RSC2YLR357W 2670 nt5.44□□□□□ -1.54
TDA11P38854 DON1YDR273W 1098 nt5.44□□□□□ -1.54
TDA11P38854 RML2YEL050C 1182 nt5.44□□□□□ -1.54
TDA11P38854 SOH1YGL127C 384 nt5.44□□□□□ -1.54
TDA11P38854 ORM1YGR038W 669 nt5.44□□□□□ -1.54
TDA11P38854 MSS1YMR023C 1581 nt5.44□□□□□ -1.54
TDA11P38854 PDI1YCL043C 1569 nt5.44□□□□□ -1.54
TDA11P38854 UTP18YJL069C 1785 nt5.44□□□□□ -1.54
TDA11P38854 SYG1YIL047C 2709 nt5.43□□□□□ -1.54
TDA11P38854 YMR027WYMR027W 1413 nt5.43□□□□□ -1.54
TDA11P38854 UBP9YER098W 2265 nt5.43□□□□□ -1.54
TDA11P38854 GCS1YDL226C 1059 nt5.43□□□□□ -1.54
TDA11P38854 BUB3YOR026W 1026 nt5.43□□□□□ -1.54
TDA11P38854 OST3YOR085W 1053 nt5.43□□□□□ -1.54
TDA11P38854 ADE12YNL220W 1302 nt5.43□□□□□ -1.54
TDA11P38854 CYK3YDL117W 2658 nt5.42□□□□□ -1.54
TDA11P38854 GPT2YKR067W 2232 nt5.42□□□□□ -1.54
TDA11P38854 YER010CYER010C 705 nt5.42□□□□□ -1.54
TDA11P38854 MCX1YBR227C 1563 nt5.42□□□□□ -1.54
TDA11P38854 ENP1YBR247C 1452 nt5.41□□□□□ -1.54
TDA11P38854 YML101C-AYML101C-A 318 nt5.41□□□□□ -1.54
TDA11P38854 YPL062WYPL062W 405 nt5.41□□□□□ -1.54
TDA11P38854 TRP5YGL026C 2124 nt5.41□□□□□ -1.54
TDA11P38854 DAL81YIR023W 2913 nt5.41□□□□□ -1.54
TDA11P38854 FOL1YNL256W 2475 nt5.4□□□□□ -1.54
TDA11P38854 ACS2YLR153C 2052 nt5.4□□□□□ -1.54
TDA11P38854 DFM1YDR411C 1026 nt5.4□□□□□ -1.54
TDA11P38854 LEU5YHR002W 1074 nt5.4□□□□□ -1.54
TDA11P38854 SPO7YAL009W 780 nt5.4□□□□□ -1.54
TDA11P38854 snR10snR10 245 nt5.4□□□□□ -1.54
TDA11P38854 RPO26YPR187W 468 nt5.4□□□□□ -1.54
TDA11P38854 ELP2YGR200C 2367 nt5.4□□□□□ -1.55
TDA11P38854 NCS6YGL211W 1080 nt5.39□□□□□ -1.55
TDA11P38854 YNL042W-BYNL042W-B 258 nt5.39□□□□□ -1.55
TDA11P38854 PWP1YLR196W 1731 nt5.39□□□□□ -1.55
TDA11P38854 PRI2YKL045W 1587 nt5.38□□□□□ -1.55
TDA11P38854 BPL1YDL141W 2073 nt5.38□□□□□ -1.55
TDA11P38854 MND2YIR025W 1107 nt5.38□□□□□ -1.55
TDA11P38854 SNO4YMR322C 714 nt5.38□□□□□ -1.55
TDA11P38854 YNL019CYNL019C 855 nt5.38□□□□□ -1.55
TDA11P38854 YNL033WYNL033W 855 nt5.38□□□□□ -1.55
TDA11P38854 PPG1YNR032W 1107 nt5.38□□□□□ -1.55
TDA11P38854 RPS15YOL040C 429 nt5.38□□□□□ -1.55
TDA11P38854 HSP33YOR391C 714 nt5.38□□□□□ -1.55
TDA11P38854 HSP32YPL280W 714 nt5.38□□□□□ -1.55
TDA11P38854 APM2YHL019C 1818 nt5.38□□□□□ -1.55
TDA11P38854 NGR1YBR212W 2019 nt5.38□□□□□ -1.55
TDA11P38854 HAP1YLR256W 4509 nt5.38□□□□□ -1.55
TDA11P38854 BRF1YGR246C 1791 nt5.37□□□□□ -1.55
TDA11P38854 BUL1YMR275C 2931 nt5.37□□□□□ -1.55
TDA11P38854 DBP8YHR169W 1296 nt5.37□□□□□ -1.55
TDA11P38854 ECM33YBR078W 1290 nt5.37□□□□□ -1.55
TDA11P38854 SUE1YPR151C 621 nt5.37□□□□□ -1.55
TDA11P38854 CHL4YDR254W 1377 nt5.37□□□□□ -1.55
TDA11P38854 PAL1YDR348C 1500 nt5.37□□□□□ -1.55
TDA11P38854 ACF2YLR144C 2340 nt5.36□□□□□ -1.55
TDA11P38854 MTC2YKL098W 1074 nt5.36□□□□□ -1.55
TDA11P38854 MRPS5YBR251W 924 nt5.36□□□□□ -1.55
TDA11P38854 TPS3YMR261C 3165 nt5.35□□□□□ -1.55
TDA11P38854 UTP4YDR324C 2331 nt5.35□□□□□ -1.55
TDA11P38854 IMA2YOL157C 1770 nt5.35□□□□□ -1.55
TDA11P38854 MCH4YOL119C 1506 nt5.35□□□□□ -1.55
TDA11P38854 YDL022C-AYDL022C-A 249 nt5.35□□□□□ -1.55
TDA11P38854 DCI1YOR180C 816 nt5.35□□□□□ -1.55
TDA11P38854 ATG12YBR217W 561 nt5.35□□□□□ -1.55
TDA11P38854 YHR182WYHR182W 2358 nt5.35□□□□□ -1.55
TDA11P38854 COR1YBL045C 1374 nt5.34□□□□□ -1.55
TDA11P38854 MTQ2YDR140W 666 nt5.34□□□□□ -1.55
TDA11P38854 APS3YJL024C 585 nt5.34□□□□□ -1.55
TDA11P38854 BUD14YAR014C 2130 nt5.34□□□□□ -1.55
TDA11P38854 SSP120YLR250W 705 nt5.34□□□□□ -1.55
TDA11P38854 CDC19YAL038W 1503 nt5.33□□□□□ -1.56
TDA11P38854 SFK1YKL051W 1062 nt5.33□□□□□ -1.56
TDA11P38854 STE50YCL032W 1041 nt5.33□□□□□ -1.56
TDA11P38854 YJL107CYJL107C 1164 nt5.32□□□□□ -1.56
TDA11P38854 PUF3YLL013C 2640 nt5.31□□□□□ -1.56
TDA11P38854 MRK1YDL079C 1506 nt5.31□□□□□ -1.56
TDA11P38854 CDC4YFL009W 2340 nt5.31□□□□□ -1.56
TDA11P38854 MMP1YLL061W 1752 nt5.31□□□□□ -1.56
TDA11P38854 SED4YCR067C 3198 nt5.3□□□□□ -1.56
TDA11P38854 STE7YDL159W 1548 nt5.3□□□□□ -1.56
TDA11P38854 ADE6YGR061C 4077 nt5.3□□□□□ -1.56
TDA11P38854 YDL119CYDL119C 924 nt5.3□□□□□ -1.56
TDA11P38854 YGL072CYGL072C 360 nt5.3□□□□□ -1.56
TDA11P38854 CBP4YGR174C 513 nt5.3□□□□□ -1.56
TDA11P38854 VMA16YHR026W 642 nt5.3□□□□□ -1.56
TDA11P38854 SOL1YNR034W 966 nt5.3□□□□□ -1.56
TDA11P38854 ASN1YPR145W 1719 nt5.3□□□□□ -1.56
TDA11P38854 ERG7YHR072W 2196 nt5.3□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms