Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.59■□□□□ 0.73
Thbs1P35441 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.59■□□□□ 0.73
Thbs1P35441 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thbs1P35441 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Thbs1P35441 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thbs1P35441 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Thbs1P35441 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thbs1P35441 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Thbs1P35441 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Thbs1P35441 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thbs1P35441 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Thbs1P35441 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Thbs1P35441 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thbs1P35441 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thbs1P35441 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Thbs1P35441 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.57■□□□□ 0.72
Thbs1P35441 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Thbs1P35441 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thbs1P35441 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thbs1P35441 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Thbs1P35441 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thbs1P35441 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Thbs1P35441 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thbs1P35441 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thbs1P35441 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Thbs1P35441 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Thbs1P35441 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Thbs1P35441 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thbs1P35441 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.53■□□□□ 0.72
Thbs1P35441 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Thbs1P35441 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.53■□□□□ 0.72
Thbs1P35441 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.53■□□□□ 0.72
Thbs1P35441 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Thbs1P35441 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thbs1P35441 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thbs1P35441 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Thbs1P35441 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thbs1P35441 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Thbs1P35441 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Thbs1P35441 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.52■□□□□ 0.71
Thbs1P35441 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Thbs1P35441 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Thbs1P35441 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.51■□□□□ 0.71
Thbs1P35441 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Thbs1P35441 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Thbs1P35441 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Thbs1P35441 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.5■□□□□ 0.71
Thbs1P35441 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Thbs1P35441 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.49■□□□□ 0.71
Thbs1P35441 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thbs1P35441 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.49■□□□□ 0.71
Thbs1P35441 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thbs1P35441 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Thbs1P35441 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Thbs1P35441 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Thbs1P35441 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Thbs1P35441 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.48■□□□□ 0.71
Thbs1P35441 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Thbs1P35441 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Thbs1P35441 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thbs1P35441 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Thbs1P35441 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thbs1P35441 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thbs1P35441 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.46■□□□□ 0.71
Thbs1P35441 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Thbs1P35441 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Thbs1P35441 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thbs1P35441 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thbs1P35441 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms