Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 BSC4YNL269W 396 nt5.12□□□□□ -1.59
CDC43P18898 RCR1YBR005W 642 nt5.12□□□□□ -1.59
CDC43P18898 IPP1YBR011C 864 nt5.12□□□□□ -1.59
CDC43P18898 SFG1YOR315W 1041 nt5.12□□□□□ -1.59
CDC43P18898 snR19snR19 568 nt5.12□□□□□ -1.59
CDC43P18898 CRP1YHR146W 1398 nt5.12□□□□□ -1.59
CDC43P18898 MSG5YNL053W 1470 nt5.12□□□□□ -1.59
CDC43P18898 NAF1YNL124W 1479 nt5.12□□□□□ -1.59
CDC43P18898 MAD3YJL013C 1548 nt5.12□□□□□ -1.59
CDC43P18898 HIS7YBR248C 1659 nt5.12□□□□□ -1.59
CDC43P18898 STB5YHR178W 2232 nt5.11□□□□□ -1.59
CDC43P18898 HST4YDR191W 1113 nt5.11□□□□□ -1.59
CDC43P18898 RML2YEL050C 1182 nt5.11□□□□□ -1.59
CDC43P18898 PRS2YER099C 957 nt5.11□□□□□ -1.59
CDC43P18898 YFR057WYFR057W 456 nt5.11□□□□□ -1.59
CDC43P18898 MED6YHR058C 888 nt5.11□□□□□ -1.59
CDC43P18898 YIL077CYIL077C 963 nt5.11□□□□□ -1.59
CDC43P18898 CMC1YKL137W 336 nt5.11□□□□□ -1.59
CDC43P18898 COX5AYNL052W 462 nt5.11□□□□□ -1.59
CDC43P18898 GLO4YOR040W 858 nt5.11□□□□□ -1.59
CDC43P18898 DXO1YDR370C 1329 nt5.11□□□□□ -1.59
CDC43P18898 ECM18YDR125C 1362 nt5.11□□□□□ -1.59
CDC43P18898 GIT1YCR098C 1557 nt5.11□□□□□ -1.59
CDC43P18898 YEL020CYEL020C 1683 nt5.11□□□□□ -1.59
CDC43P18898 SLM5YCR024C 1479 nt5.1□□□□□ -1.59
CDC43P18898 GPM2YDL021W 936 nt5.1□□□□□ -1.59
CDC43P18898 RPN9YDR427W 1182 nt5.1□□□□□ -1.59
CDC43P18898 YFL019CYFL019C 354 nt5.1□□□□□ -1.59
CDC43P18898 IME2YJL106W 1938 nt5.1□□□□□ -1.59
CDC43P18898 HOT13YKL084W 351 nt5.1□□□□□ -1.59
CDC43P18898 DUS4YLR405W 1104 nt5.1□□□□□ -1.59
CDC43P18898 LAT1YNL071W 1449 nt5.1□□□□□ -1.59
CDC43P18898 END3YNL084C 1050 nt5.1□□□□□ -1.59
CDC43P18898 TEP1YNL128W 1305 nt5.1□□□□□ -1.59
CDC43P18898 TEX1YNL253W 1269 nt5.1□□□□□ -1.59
CDC43P18898 YPT10YBR264C 600 nt5.1□□□□□ -1.59
CDC43P18898 SLS1YLR139C 1932 nt5.09□□□□□ -1.59
CDC43P18898 RAD7YJR052W 1698 nt5.09□□□□□ -1.59
CDC43P18898 MPA43YNL249C 1629 nt5.09□□□□□ -1.59
CDC43P18898 HAS1YMR290C 1518 nt5.09□□□□□ -1.59
CDC43P18898 YLH47YPR125W 1365 nt5.09□□□□□ -1.59
CDC43P18898 AIM6YDL237W 1173 nt5.09□□□□□ -1.59
CDC43P18898 BTT1YDR252W 450 nt5.09□□□□□ -1.59
CDC43P18898 TFG2YGR005C 1203 nt5.09□□□□□ -1.59
CDC43P18898 NIT3YLR351C 876 nt5.09□□□□□ -1.59
CDC43P18898 GET4YOR164C 939 nt5.09□□□□□ -1.59
CDC43P18898 DSC3YOR223W 879 nt5.09□□□□□ -1.59
CDC43P18898 YBR027CYBR027C 333 nt5.09□□□□□ -1.59
CDC43P18898 YPL073CYPL073C 486 nt5.09□□□□□ -1.59
CDC43P18898 ASR1YPR093C 867 nt5.09□□□□□ -1.59
CDC43P18898 SAC6YDR129C 1929 nt5.09□□□□□ -1.6
CDC43P18898 PAC2YER007W 1557 nt5.08□□□□□ -1.6
CDC43P18898 PFK2YMR205C 2880 nt5.08□□□□□ -1.6
CDC43P18898 SES1YDR023W 1389 nt5.08□□□□□ -1.6
CDC43P18898 YDR042CYDR042C 603 nt5.08□□□□□ -1.6
CDC43P18898 YDR220CYDR220C 294 nt5.08□□□□□ -1.6
CDC43P18898 BMH1YER177W 804 nt5.08□□□□□ -1.6
CDC43P18898 STE2YFL026W 1296 nt5.08□□□□□ -1.6
CDC43P18898 ACT1YFL039C 1128 nt5.08□□□□□ -1.6
CDC43P18898 ERJ5YFR041C 888 nt5.08□□□□□ -1.6
CDC43P18898 SPO11YHL022C 1197 nt5.08□□□□□ -1.6
CDC43P18898 SOD2YHR008C 702 nt5.08□□□□□ -1.6
CDC43P18898 YJL144WYJL144W 315 nt5.08□□□□□ -1.6
CDC43P18898 YJL160CYJL160C 864 nt5.08□□□□□ -1.6
CDC43P18898 RPS10BYMR230W 318 nt5.08□□□□□ -1.6
CDC43P18898 YOL099CYOL099C 492 nt5.08□□□□□ -1.6
CDC43P18898 IZH4YOL101C 939 nt5.08□□□□□ -1.6
CDC43P18898 MRPL23YOR150W 492 nt5.08□□□□□ -1.6
CDC43P18898 YPL113CYPL113C 1191 nt5.08□□□□□ -1.6
CDC43P18898 YPR071WYPR071W 636 nt5.08□□□□□ -1.6
CDC43P18898 ADH5YBR145W 1056 nt5.08□□□□□ -1.6
CDC43P18898 CSH1YBR161W 1131 nt5.08□□□□□ -1.6
CDC43P18898 GAA1YLR088W 1845 nt5.08□□□□□ -1.6
CDC43P18898 PAP2YOL115W 1755 nt5.08□□□□□ -1.6
CDC43P18898 MTC5YDR128W 3447 nt5.08□□□□□ -1.6
CDC43P18898 AFG1YEL052W 1530 nt5.07□□□□□ -1.6
CDC43P18898 LAP2YNL045W 2016 nt5.07□□□□□ -1.6
CDC43P18898 KEL1YHR158C 3495 nt5.07□□□□□ -1.6
CDC43P18898 XBP1YIL101C 1944 nt5.07□□□□□ -1.6
CDC43P18898 UBP8YMR223W 1416 nt5.07□□□□□ -1.6
CDC43P18898 ALG1YBR110W 1350 nt5.07□□□□□ -1.6
CDC43P18898 YDL119CYDL119C 924 nt5.07□□□□□ -1.6
CDC43P18898 TGA1tA(UGC)A 73 nt5.07□□□□□ -1.6
CDC43P18898 tA(UGC)EtA(UGC)E 73 nt5.07□□□□□ -1.6
CDC43P18898 tA(UGC)GtA(UGC)G 73 nt5.07□□□□□ -1.6
CDC43P18898 tA(UGC)LtA(UGC)L 73 nt5.07□□□□□ -1.6
CDC43P18898 tA(UGC)OtA(UGC)O 73 nt5.07□□□□□ -1.6
CDC43P18898 NUP42YDR192C 1293 nt5.07□□□□□ -1.6
CDC43P18898 COX20YDR231C 618 nt5.07□□□□□ -1.6
CDC43P18898 CAF16YFL028C 870 nt5.07□□□□□ -1.6
CDC43P18898 SCEIQ0160 708 nt5.07□□□□□ -1.6
CDC43P18898 YLR124WYLR124W 345 nt5.07□□□□□ -1.6
CDC43P18898 YML034C-AYML034C-A 399 nt5.07□□□□□ -1.6
CDC43P18898 SPC2YML055W 537 nt5.07□□□□□ -1.6
CDC43P18898 HEK2YBL032W 1146 nt5.07□□□□□ -1.6
CDC43P18898 TAF3YPL011C 1062 nt5.07□□□□□ -1.6
CDC43P18898 POC4YPL144W 447 nt5.07□□□□□ -1.6
CDC43P18898 YPR027CYPR027C 834 nt5.07□□□□□ -1.6
CDC43P18898 PMT3YOR321W 2262 nt5.07□□□□□ -1.6
CDC43P18898 LDB17YDL146W 1476 nt5.07□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms