Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.9■□□□□ 0.46
Trav15d-1-dv6d-1A0A075B624 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Gm6311-201ENSMUST00000073790 878 ntBASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15d-1-dv6d-1A0A075B624 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms