Protein–RNA interactions for Protein: Q9QYB1

Clic4, Chloride intracellular channel protein 4, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clic4Q9QYB1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.72■■■□□ 2.67
Clic4Q9QYB1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Clic4Q9QYB1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
Clic4Q9QYB1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Clic4Q9QYB1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Clic4Q9QYB1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.53■■■□□ 2.64
Clic4Q9QYB1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
Clic4Q9QYB1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.42■■■□□ 2.62
Clic4Q9QYB1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.41■■■□□ 2.62
Clic4Q9QYB1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Clic4Q9QYB1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Clic4Q9QYB1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Clic4Q9QYB1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Clic4Q9QYB1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Clic4Q9QYB1 Rab21-202ENSMUST00000218831 843 ntBASIC31.25■■■□□ 2.59
Clic4Q9QYB1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Clic4Q9QYB1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Clic4Q9QYB1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.21■■■□□ 2.59
Clic4Q9QYB1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Clic4Q9QYB1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Clic4Q9QYB1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Clic4Q9QYB1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Clic4Q9QYB1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Clic4Q9QYB1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Clic4Q9QYB1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Clic4Q9QYB1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Clic4Q9QYB1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Clic4Q9QYB1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Clic4Q9QYB1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Clic4Q9QYB1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.05■■■□□ 2.56
Clic4Q9QYB1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Clic4Q9QYB1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
Clic4Q9QYB1 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.02■■■□□ 2.56
Clic4Q9QYB1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31■■■□□ 2.55
Clic4Q9QYB1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.98■■■□□ 2.55
Clic4Q9QYB1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Clic4Q9QYB1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.94■■■□□ 2.54
Clic4Q9QYB1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Clic4Q9QYB1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Clic4Q9QYB1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Clic4Q9QYB1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Clic4Q9QYB1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Clic4Q9QYB1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.87■■■□□ 2.53
Clic4Q9QYB1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Clic4Q9QYB1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
Clic4Q9QYB1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.83■■■□□ 2.53
Clic4Q9QYB1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Clic4Q9QYB1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Clic4Q9QYB1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Clic4Q9QYB1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Clic4Q9QYB1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Clic4Q9QYB1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Clic4Q9QYB1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Clic4Q9QYB1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Clic4Q9QYB1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.67■■■□□ 2.5
Clic4Q9QYB1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Clic4Q9QYB1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Clic4Q9QYB1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Clic4Q9QYB1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Clic4Q9QYB1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.56■■■□□ 2.48
Clic4Q9QYB1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Clic4Q9QYB1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Clic4Q9QYB1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Clic4Q9QYB1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Clic4Q9QYB1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Clic4Q9QYB1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Clic4Q9QYB1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Clic4Q9QYB1 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.42■■■□□ 2.46
Clic4Q9QYB1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Clic4Q9QYB1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Clic4Q9QYB1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Clic4Q9QYB1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Clic4Q9QYB1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Clic4Q9QYB1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Clic4Q9QYB1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Clic4Q9QYB1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Clic4Q9QYB1 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.29■■■□□ 2.44
Clic4Q9QYB1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Clic4Q9QYB1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.24■■■□□ 2.43
Clic4Q9QYB1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Clic4Q9QYB1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Clic4Q9QYB1 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.16■■■□□ 2.42
Clic4Q9QYB1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.12■■■□□ 2.41
Clic4Q9QYB1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Clic4Q9QYB1 Mipep-204ENSMUST00000225043 1548 ntBASIC30.11■■■□□ 2.41
Clic4Q9QYB1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Clic4Q9QYB1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Clic4Q9QYB1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.08■■■□□ 2.41
Clic4Q9QYB1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Clic4Q9QYB1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Clic4Q9QYB1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Clic4Q9QYB1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
Clic4Q9QYB1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.99■■■□□ 2.39
Clic4Q9QYB1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Clic4Q9QYB1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Clic4Q9QYB1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Clic4Q9QYB1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Clic4Q9QYB1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Clic4Q9QYB1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.95■■■□□ 2.38
Clic4Q9QYB1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms