Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Scn5aQ9JJV9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Scn5aQ9JJV9 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.87■■■□□ 2.37
Scn5aQ9JJV9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
Scn5aQ9JJV9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Scn5aQ9JJV9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Scn5aQ9JJV9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Scn5aQ9JJV9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Scn5aQ9JJV9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Scn5aQ9JJV9 Gm27322-201ENSMUST00000184007 104 ntBASIC29.71■■■□□ 2.35
Scn5aQ9JJV9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Scn5aQ9JJV9 Gm24804-201ENSMUST00000174982 85 ntBASIC29.7■■■□□ 2.34
Scn5aQ9JJV9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Scn5aQ9JJV9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.67■■■□□ 2.34
Scn5aQ9JJV9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Scn5aQ9JJV9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.65■■■□□ 2.34
Scn5aQ9JJV9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.63■■■□□ 2.33
Scn5aQ9JJV9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Scn5aQ9JJV9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Scn5aQ9JJV9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Scn5aQ9JJV9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Scn5aQ9JJV9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.44■■■□□ 2.3
Scn5aQ9JJV9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Scn5aQ9JJV9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Scn5aQ9JJV9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Scn5aQ9JJV9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.31■■■□□ 2.28
Scn5aQ9JJV9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.27■■■□□ 2.28
Scn5aQ9JJV9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.25■■■□□ 2.27
Scn5aQ9JJV9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Scn5aQ9JJV9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Scn5aQ9JJV9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scn5aQ9JJV9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Scn5aQ9JJV9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Scn5aQ9JJV9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Scn5aQ9JJV9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Scn5aQ9JJV9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Scn5aQ9JJV9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Scn5aQ9JJV9 Zfp131-205ENSMUST00000223812 663 ntBASIC29.16■■■□□ 2.26
Scn5aQ9JJV9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Scn5aQ9JJV9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Scn5aQ9JJV9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Scn5aQ9JJV9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Scn5aQ9JJV9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Scn5aQ9JJV9 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.08■■■□□ 2.25
Scn5aQ9JJV9 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.07■■■□□ 2.24
Scn5aQ9JJV9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scn5aQ9JJV9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scn5aQ9JJV9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scn5aQ9JJV9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Scn5aQ9JJV9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Scn5aQ9JJV9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Scn5aQ9JJV9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Scn5aQ9JJV9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Scn5aQ9JJV9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Scn5aQ9JJV9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scn5aQ9JJV9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Scn5aQ9JJV9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Scn5aQ9JJV9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Scn5aQ9JJV9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Scn5aQ9JJV9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Scn5aQ9JJV9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Scn5aQ9JJV9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Scn5aQ9JJV9 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.79■■■□□ 2.2
Scn5aQ9JJV9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Scn5aQ9JJV9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.74■■■□□ 2.19
Scn5aQ9JJV9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Scn5aQ9JJV9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Scn5aQ9JJV9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Scn5aQ9JJV9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.67■■■□□ 2.18
Scn5aQ9JJV9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Scn5aQ9JJV9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Scn5aQ9JJV9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.65■■■□□ 2.18
Scn5aQ9JJV9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Scn5aQ9JJV9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scn5aQ9JJV9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Scn5aQ9JJV9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Scn5aQ9JJV9 Gm16148-201ENSMUST00000119653 893 ntBASIC28.51■■■□□ 2.15
Scn5aQ9JJV9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Scn5aQ9JJV9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Scn5aQ9JJV9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Scn5aQ9JJV9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Scn5aQ9JJV9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Scn5aQ9JJV9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Scn5aQ9JJV9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Scn5aQ9JJV9 Peli2-204ENSMUST00000226513 1320 ntBASIC28.42■■■□□ 2.14
Scn5aQ9JJV9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Scn5aQ9JJV9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Scn5aQ9JJV9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Scn5aQ9JJV9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Scn5aQ9JJV9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Scn5aQ9JJV9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Scn5aQ9JJV9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.34■■■□□ 2.13
Scn5aQ9JJV9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Scn5aQ9JJV9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Scn5aQ9JJV9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
Scn5aQ9JJV9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Scn5aQ9JJV9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.31■■■□□ 2.12
Scn5aQ9JJV9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Scn5aQ9JJV9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Scn5aQ9JJV9 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms