Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rrp8Q9DB85 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rrp8Q9DB85 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rrp8Q9DB85 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Rrp8Q9DB85 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.74■■■□□ 2.03
Rrp8Q9DB85 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rrp8Q9DB85 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.72■■■□□ 2.03
Rrp8Q9DB85 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rrp8Q9DB85 Gm24804-201ENSMUST00000174982 85 ntBASIC27.65■■■□□ 2.02
Rrp8Q9DB85 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.62■■■□□ 2.01
Rrp8Q9DB85 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rrp8Q9DB85 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
Rrp8Q9DB85 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.55■■■□□ 2
Rrp8Q9DB85 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rrp8Q9DB85 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rrp8Q9DB85 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.51■■□□□ 1.99
Rrp8Q9DB85 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rrp8Q9DB85 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rrp8Q9DB85 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rrp8Q9DB85 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.4■■□□□ 1.98
Rrp8Q9DB85 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rrp8Q9DB85 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rrp8Q9DB85 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rrp8Q9DB85 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.24■■□□□ 1.95
Rrp8Q9DB85 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Rrp8Q9DB85 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rrp8Q9DB85 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rrp8Q9DB85 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rrp8Q9DB85 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rrp8Q9DB85 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rrp8Q9DB85 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rrp8Q9DB85 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rrp8Q9DB85 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rrp8Q9DB85 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rrp8Q9DB85 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.13■■□□□ 1.93
Rrp8Q9DB85 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rrp8Q9DB85 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.1■■□□□ 1.93
Rrp8Q9DB85 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rrp8Q9DB85 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rrp8Q9DB85 Zfp131-205ENSMUST00000223812 663 ntBASIC27.06■■□□□ 1.92
Rrp8Q9DB85 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rrp8Q9DB85 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.04■■□□□ 1.92
Rrp8Q9DB85 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.03■■□□□ 1.92
Rrp8Q9DB85 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rrp8Q9DB85 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rrp8Q9DB85 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Rrp8Q9DB85 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rrp8Q9DB85 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Rrp8Q9DB85 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rrp8Q9DB85 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rrp8Q9DB85 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rrp8Q9DB85 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rrp8Q9DB85 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.88■■□□□ 1.89
Rrp8Q9DB85 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rrp8Q9DB85 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rrp8Q9DB85 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Rrp8Q9DB85 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rrp8Q9DB85 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.78■■□□□ 1.88
Rrp8Q9DB85 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rrp8Q9DB85 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rrp8Q9DB85 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Rrp8Q9DB85 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rrp8Q9DB85 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rrp8Q9DB85 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rrp8Q9DB85 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rrp8Q9DB85 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rrp8Q9DB85 Gm16148-201ENSMUST00000119653 893 ntBASIC26.67■■□□□ 1.86
Rrp8Q9DB85 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Rrp8Q9DB85 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rrp8Q9DB85 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rrp8Q9DB85 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rrp8Q9DB85 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.56■■□□□ 1.84
Rrp8Q9DB85 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Rrp8Q9DB85 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.55■■□□□ 1.84
Rrp8Q9DB85 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rrp8Q9DB85 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rrp8Q9DB85 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rrp8Q9DB85 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Rrp8Q9DB85 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rrp8Q9DB85 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rrp8Q9DB85 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rrp8Q9DB85 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rrp8Q9DB85 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rrp8Q9DB85 Peli2-204ENSMUST00000226513 1320 ntBASIC26.43■■□□□ 1.82
Rrp8Q9DB85 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.42■■□□□ 1.82
Rrp8Q9DB85 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rrp8Q9DB85 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Rrp8Q9DB85 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
Rrp8Q9DB85 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rrp8Q9DB85 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rrp8Q9DB85 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rrp8Q9DB85 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rrp8Q9DB85 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rrp8Q9DB85 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Rrp8Q9DB85 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.3■■□□□ 1.8
Rrp8Q9DB85 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.29■■□□□ 1.8
Rrp8Q9DB85 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.29■■□□□ 1.8
Rrp8Q9DB85 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rrp8Q9DB85 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Rrp8Q9DB85 Mipep-204ENSMUST00000225043 1548 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms