Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31,23■■■□□ 2,59
Chd1lQ9CXF7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31,19■■■□□ 2,58
Chd1lQ9CXF7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Chd1lQ9CXF7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31,18■■■□□ 2,58
Chd1lQ9CXF7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
Chd1lQ9CXF7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31,05■■■□□ 2,56
Chd1lQ9CXF7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,01■■■□□ 2,56
Chd1lQ9CXF7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,53
Chd1lQ9CXF7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Chd1lQ9CXF7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,84■■■□□ 2,53
Chd1lQ9CXF7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Chd1lQ9CXF7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30,82■■■□□ 2,52
Chd1lQ9CXF7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Chd1lQ9CXF7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Chd1lQ9CXF7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30,74■■■□□ 2,51
Chd1lQ9CXF7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,5
Chd1lQ9CXF7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,5
Chd1lQ9CXF7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Chd1lQ9CXF7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30,61■■■□□ 2,49
Chd1lQ9CXF7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,59■■■□□ 2,49
Chd1lQ9CXF7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,57■■■□□ 2,48
Chd1lQ9CXF7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30,5■■■□□ 2,47
Chd1lQ9CXF7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Chd1lQ9CXF7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Chd1lQ9CXF7 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,45■■■□□ 2,46
Chd1lQ9CXF7 Gm27325-201ENSMUST00000175467 74 ntBASIC30,44■■■□□ 2,46
Chd1lQ9CXF7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Chd1lQ9CXF7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30,39■■■□□ 2,46
Chd1lQ9CXF7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Chd1lQ9CXF7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Chd1lQ9CXF7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Chd1lQ9CXF7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Chd1lQ9CXF7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Chd1lQ9CXF7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30,27■■■□□ 2,44
Chd1lQ9CXF7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30,26■■■□□ 2,43
Chd1lQ9CXF7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Chd1lQ9CXF7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Chd1lQ9CXF7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30,23■■■□□ 2,43
Chd1lQ9CXF7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Chd1lQ9CXF7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Chd1lQ9CXF7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,42
Chd1lQ9CXF7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Chd1lQ9CXF7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30,19■■■□□ 2,42
Chd1lQ9CXF7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Chd1lQ9CXF7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Chd1lQ9CXF7 Gm6658-202ENSMUST00000209493 1885 ntBASIC30,15■■■□□ 2,42
Chd1lQ9CXF7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30,15■■■□□ 2,42
Chd1lQ9CXF7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,42
Chd1lQ9CXF7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30,12■■■□□ 2,41
Chd1lQ9CXF7 Zfp131-207ENSMUST00000224946 1783 ntBASIC30,11■■■□□ 2,41
Chd1lQ9CXF7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Chd1lQ9CXF7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Chd1lQ9CXF7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30,08■■■□□ 2,41
Chd1lQ9CXF7 Zxda-201ENSMUST00000117281 2621 ntBASIC30,07■■■□□ 2,4
Chd1lQ9CXF7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Chd1lQ9CXF7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,05■■■□□ 2,4
Chd1lQ9CXF7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Chd1lQ9CXF7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Chd1lQ9CXF7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,96■■■□□ 2,39
Chd1lQ9CXF7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Chd1lQ9CXF7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29,95■■■□□ 2,39
Chd1lQ9CXF7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29,94■■■□□ 2,38
Chd1lQ9CXF7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Chd1lQ9CXF7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29,9■■■□□ 2,38
Chd1lQ9CXF7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Chd1lQ9CXF7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29,87■■■□□ 2,37
Chd1lQ9CXF7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Chd1lQ9CXF7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29,82■■■□□ 2,36
Chd1lQ9CXF7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,82■■■□□ 2,36
Chd1lQ9CXF7 Gm6206-201ENSMUST00000133472 2199 ntBASIC29,79■■■□□ 2,36
Chd1lQ9CXF7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,79■■■□□ 2,36
Chd1lQ9CXF7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Chd1lQ9CXF7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Chd1lQ9CXF7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Chd1lQ9CXF7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,36
Chd1lQ9CXF7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29,76■■■□□ 2,35
Chd1lQ9CXF7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29,76■■■□□ 2,35
Chd1lQ9CXF7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,75■■■□□ 2,35
Chd1lQ9CXF7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Chd1lQ9CXF7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29,74■■■□□ 2,35
Chd1lQ9CXF7 Gm25238-201ENSMUST00000174914 89 ntBASIC29,71■■■□□ 2,35
Chd1lQ9CXF7 Gm9905-201ENSMUST00000065740 1845 ntBASIC29,71■■■□□ 2,35
Chd1lQ9CXF7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Chd1lQ9CXF7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29,7■■■□□ 2,34
Chd1lQ9CXF7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29,69■■■□□ 2,34
Chd1lQ9CXF7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29,69■■■□□ 2,34
Chd1lQ9CXF7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,68■■■□□ 2,34
Chd1lQ9CXF7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Chd1lQ9CXF7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Chd1lQ9CXF7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Chd1lQ9CXF7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Chd1lQ9CXF7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Chd1lQ9CXF7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Chd1lQ9CXF7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29,57■■■□□ 2,32
Chd1lQ9CXF7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Chd1lQ9CXF7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Chd1lQ9CXF7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29,51■■■□□ 2,31
Chd1lQ9CXF7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29,49■■■□□ 2,31
Chd1lQ9CXF7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Chd1lQ9CXF7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms