Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.54■■■□□ 2
Lrrc40Q9CRC8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lrrc40Q9CRC8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lrrc40Q9CRC8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.48■■□□□ 1.99
Lrrc40Q9CRC8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Lrrc40Q9CRC8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Lrrc40Q9CRC8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.37■■□□□ 1.97
Lrrc40Q9CRC8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Lrrc40Q9CRC8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Lrrc40Q9CRC8 Rab21-202ENSMUST00000218831 843 ntBASIC27.3■■□□□ 1.96
Lrrc40Q9CRC8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Lrrc40Q9CRC8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Lrrc40Q9CRC8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Lrrc40Q9CRC8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Lrrc40Q9CRC8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.16■■□□□ 1.94
Lrrc40Q9CRC8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Lrrc40Q9CRC8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lrrc40Q9CRC8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lrrc40Q9CRC8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.12■■□□□ 1.93
Lrrc40Q9CRC8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Lrrc40Q9CRC8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lrrc40Q9CRC8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lrrc40Q9CRC8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lrrc40Q9CRC8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Lrrc40Q9CRC8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Lrrc40Q9CRC8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lrrc40Q9CRC8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Lrrc40Q9CRC8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.99■■□□□ 1.91
Lrrc40Q9CRC8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.99■■□□□ 1.91
Lrrc40Q9CRC8 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.99■■□□□ 1.91
Lrrc40Q9CRC8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lrrc40Q9CRC8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Lrrc40Q9CRC8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Lrrc40Q9CRC8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Lrrc40Q9CRC8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Lrrc40Q9CRC8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lrrc40Q9CRC8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Lrrc40Q9CRC8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Lrrc40Q9CRC8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Lrrc40Q9CRC8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Lrrc40Q9CRC8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lrrc40Q9CRC8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.85■■□□□ 1.89
Lrrc40Q9CRC8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Lrrc40Q9CRC8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Lrrc40Q9CRC8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Lrrc40Q9CRC8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Lrrc40Q9CRC8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.77■■□□□ 1.88
Lrrc40Q9CRC8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Lrrc40Q9CRC8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.76■■□□□ 1.87
Lrrc40Q9CRC8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Lrrc40Q9CRC8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Lrrc40Q9CRC8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Lrrc40Q9CRC8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Lrrc40Q9CRC8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Lrrc40Q9CRC8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Lrrc40Q9CRC8 Gm25262-201ENSMUST00000174934 133 ntBASIC26.65■■□□□ 1.86
Lrrc40Q9CRC8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Lrrc40Q9CRC8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lrrc40Q9CRC8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Lrrc40Q9CRC8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Lrrc40Q9CRC8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lrrc40Q9CRC8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Lrrc40Q9CRC8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lrrc40Q9CRC8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lrrc40Q9CRC8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Lrrc40Q9CRC8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Lrrc40Q9CRC8 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.41■■□□□ 1.82
Lrrc40Q9CRC8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Lrrc40Q9CRC8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Lrrc40Q9CRC8 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.39■■□□□ 1.81
Lrrc40Q9CRC8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lrrc40Q9CRC8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Lrrc40Q9CRC8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lrrc40Q9CRC8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lrrc40Q9CRC8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrrc40Q9CRC8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrrc40Q9CRC8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrrc40Q9CRC8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.28■■□□□ 1.8
Lrrc40Q9CRC8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.27■■□□□ 1.8
Lrrc40Q9CRC8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lrrc40Q9CRC8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Lrrc40Q9CRC8 Mipep-204ENSMUST00000225043 1548 ntBASIC26.24■■□□□ 1.79
Lrrc40Q9CRC8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Lrrc40Q9CRC8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Lrrc40Q9CRC8 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.21■■□□□ 1.79
Lrrc40Q9CRC8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrrc40Q9CRC8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Lrrc40Q9CRC8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lrrc40Q9CRC8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lrrc40Q9CRC8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.18■■□□□ 1.78
Lrrc40Q9CRC8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Lrrc40Q9CRC8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.12■■□□□ 1.77
Lrrc40Q9CRC8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Lrrc40Q9CRC8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.1■■□□□ 1.77
Lrrc40Q9CRC8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lrrc40Q9CRC8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Lrrc40Q9CRC8 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.07■■□□□ 1.76
Lrrc40Q9CRC8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Lrrc40Q9CRC8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lrrc40Q9CRC8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms