Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpl39lQ9CQD0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpl39lQ9CQD0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpl39lQ9CQD0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Rpl39lQ9CQD0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rpl39lQ9CQD0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpl39lQ9CQD0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpl39lQ9CQD0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpl39lQ9CQD0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rpl39lQ9CQD0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rpl39lQ9CQD0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpl39lQ9CQD0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpl39lQ9CQD0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpl39lQ9CQD0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.51■□□□□ 0.39
Rpl39lQ9CQD0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpl39lQ9CQD0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpl39lQ9CQD0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpl39lQ9CQD0 Gm24109-201ENSMUST00000175489 103 ntBASIC17.45■□□□□ 0.38
Rpl39lQ9CQD0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl39lQ9CQD0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl39lQ9CQD0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Rpl39lQ9CQD0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rpl39lQ9CQD0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rpl39lQ9CQD0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl39lQ9CQD0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.35■□□□□ 0.37
Rpl39lQ9CQD0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl39lQ9CQD0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl39lQ9CQD0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl39lQ9CQD0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl39lQ9CQD0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl39lQ9CQD0 Gm23366-201ENSMUST00000175022 89 ntBASIC17.32■□□□□ 0.36
Rpl39lQ9CQD0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl39lQ9CQD0 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.3■□□□□ 0.36
Rpl39lQ9CQD0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl39lQ9CQD0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl39lQ9CQD0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl39lQ9CQD0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpl39lQ9CQD0 Zxda-201ENSMUST00000117281 2621 ntBASIC17.26■□□□□ 0.35
Rpl39lQ9CQD0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl39lQ9CQD0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl39lQ9CQD0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rpl39lQ9CQD0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rpl39lQ9CQD0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rpl39lQ9CQD0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rpl39lQ9CQD0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpl39lQ9CQD0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.17■□□□□ 0.34
Rpl39lQ9CQD0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rpl39lQ9CQD0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl39lQ9CQD0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl39lQ9CQD0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.13■□□□□ 0.33
Rpl39lQ9CQD0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl39lQ9CQD0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl39lQ9CQD0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.1■□□□□ 0.33
Rpl39lQ9CQD0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl39lQ9CQD0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl39lQ9CQD0 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.1■□□□□ 0.33
Rpl39lQ9CQD0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpl39lQ9CQD0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl39lQ9CQD0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpl39lQ9CQD0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl39lQ9CQD0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl39lQ9CQD0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpl39lQ9CQD0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpl39lQ9CQD0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.03■□□□□ 0.32
Rpl39lQ9CQD0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl39lQ9CQD0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpl39lQ9CQD0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl39lQ9CQD0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl39lQ9CQD0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpl39lQ9CQD0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpl39lQ9CQD0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpl39lQ9CQD0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpl39lQ9CQD0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl39lQ9CQD0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl39lQ9CQD0 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.99■□□□□ 0.31
Rpl39lQ9CQD0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.99■□□□□ 0.31
Rpl39lQ9CQD0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpl39lQ9CQD0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpl39lQ9CQD0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl39lQ9CQD0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl39lQ9CQD0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl39lQ9CQD0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl39lQ9CQD0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpl39lQ9CQD0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpl39lQ9CQD0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl39lQ9CQD0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl39lQ9CQD0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl39lQ9CQD0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl39lQ9CQD0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpl39lQ9CQD0 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.91■□□□□ 0.3
Rpl39lQ9CQD0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpl39lQ9CQD0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpl39lQ9CQD0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpl39lQ9CQD0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpl39lQ9CQD0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl39lQ9CQD0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl39lQ9CQD0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpl39lQ9CQD0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl39lQ9CQD0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpl39lQ9CQD0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms