Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Homer3Q99JP6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.27■■□□□ 1.96
Homer3Q99JP6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Homer3Q99JP6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Homer3Q99JP6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Homer3Q99JP6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Homer3Q99JP6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Homer3Q99JP6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Homer3Q99JP6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Homer3Q99JP6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.03■■□□□ 1.92
Homer3Q99JP6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Homer3Q99JP6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Homer3Q99JP6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Homer3Q99JP6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Homer3Q99JP6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.99■■□□□ 1.91
Homer3Q99JP6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Homer3Q99JP6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Homer3Q99JP6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.92■■□□□ 1.9
Homer3Q99JP6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
Homer3Q99JP6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Homer3Q99JP6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Homer3Q99JP6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Homer3Q99JP6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.83■■□□□ 1.89
Homer3Q99JP6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Homer3Q99JP6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Homer3Q99JP6 Gm25238-201ENSMUST00000174914 89 ntBASIC26.78■■□□□ 1.88
Homer3Q99JP6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Homer3Q99JP6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Homer3Q99JP6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.76■■□□□ 1.88
Homer3Q99JP6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Homer3Q99JP6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Homer3Q99JP6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Homer3Q99JP6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.71■■□□□ 1.87
Homer3Q99JP6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.71■■□□□ 1.87
Homer3Q99JP6 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.68■■□□□ 1.86
Homer3Q99JP6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.63■■□□□ 1.85
Homer3Q99JP6 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.61■■□□□ 1.85
Homer3Q99JP6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Homer3Q99JP6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Homer3Q99JP6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Homer3Q99JP6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.55■■□□□ 1.84
Homer3Q99JP6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Homer3Q99JP6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
Homer3Q99JP6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Homer3Q99JP6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Homer3Q99JP6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Homer3Q99JP6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Homer3Q99JP6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Homer3Q99JP6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
Homer3Q99JP6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Homer3Q99JP6 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.45■■□□□ 1.82
Homer3Q99JP6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Homer3Q99JP6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Homer3Q99JP6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.42■■□□□ 1.82
Homer3Q99JP6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.4■■□□□ 1.82
Homer3Q99JP6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.39■■□□□ 1.82
Homer3Q99JP6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
Homer3Q99JP6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Homer3Q99JP6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Homer3Q99JP6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Homer3Q99JP6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Homer3Q99JP6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Homer3Q99JP6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Homer3Q99JP6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Homer3Q99JP6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Homer3Q99JP6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Homer3Q99JP6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.23■■□□□ 1.79
Homer3Q99JP6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Homer3Q99JP6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.22■■□□□ 1.79
Homer3Q99JP6 Rab21-202ENSMUST00000218831 843 ntBASIC26.21■■□□□ 1.79
Homer3Q99JP6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Homer3Q99JP6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.19■■□□□ 1.78
Homer3Q99JP6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Homer3Q99JP6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Homer3Q99JP6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Homer3Q99JP6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.16■■□□□ 1.78
Homer3Q99JP6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Homer3Q99JP6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Homer3Q99JP6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Homer3Q99JP6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Homer3Q99JP6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Homer3Q99JP6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.11■■□□□ 1.77
Homer3Q99JP6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Homer3Q99JP6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Homer3Q99JP6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Homer3Q99JP6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Homer3Q99JP6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Homer3Q99JP6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Homer3Q99JP6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Homer3Q99JP6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Homer3Q99JP6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Homer3Q99JP6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Homer3Q99JP6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.99■■□□□ 1.75
Homer3Q99JP6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Homer3Q99JP6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Homer3Q99JP6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Homer3Q99JP6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Homer3Q99JP6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Homer3Q99JP6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Homer3Q99JP6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms