Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Pcdhb5Q91XZ5 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.72■■■□□ 2.99
Pcdhb5Q91XZ5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Pcdhb5Q91XZ5 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.64■■■□□ 2.98
Pcdhb5Q91XZ5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Pcdhb5Q91XZ5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
Pcdhb5Q91XZ5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Pcdhb5Q91XZ5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Pcdhb5Q91XZ5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.94
Pcdhb5Q91XZ5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.44■■■□□ 2.94
Pcdhb5Q91XZ5 Gm27322-201ENSMUST00000184007 104 ntBASIC33.42■■■□□ 2.94
Pcdhb5Q91XZ5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
Pcdhb5Q91XZ5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Pcdhb5Q91XZ5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Pcdhb5Q91XZ5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.92
Pcdhb5Q91XZ5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Pcdhb5Q91XZ5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Pcdhb5Q91XZ5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.17■■■□□ 2.9
Pcdhb5Q91XZ5 Gm24804-201ENSMUST00000174982 85 ntBASIC33.1■■■□□ 2.89
Pcdhb5Q91XZ5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Pcdhb5Q91XZ5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.09■■■□□ 2.89
Pcdhb5Q91XZ5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Pcdhb5Q91XZ5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Pcdhb5Q91XZ5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.01■■■□□ 2.87
Pcdhb5Q91XZ5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.98■■■□□ 2.87
Pcdhb5Q91XZ5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pcdhb5Q91XZ5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pcdhb5Q91XZ5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pcdhb5Q91XZ5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pcdhb5Q91XZ5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Pcdhb5Q91XZ5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Pcdhb5Q91XZ5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Pcdhb5Q91XZ5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pcdhb5Q91XZ5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Pcdhb5Q91XZ5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Pcdhb5Q91XZ5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pcdhb5Q91XZ5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Pcdhb5Q91XZ5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pcdhb5Q91XZ5 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.7■■■□□ 2.83
Pcdhb5Q91XZ5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
Pcdhb5Q91XZ5 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.68■■■□□ 2.82
Pcdhb5Q91XZ5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.65■■■□□ 2.82
Pcdhb5Q91XZ5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Pcdhb5Q91XZ5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Pcdhb5Q91XZ5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Pcdhb5Q91XZ5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Pcdhb5Q91XZ5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
Pcdhb5Q91XZ5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Pcdhb5Q91XZ5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pcdhb5Q91XZ5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Pcdhb5Q91XZ5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Pcdhb5Q91XZ5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pcdhb5Q91XZ5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Pcdhb5Q91XZ5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Pcdhb5Q91XZ5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pcdhb5Q91XZ5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pcdhb5Q91XZ5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.44■■■□□ 2.78
Pcdhb5Q91XZ5 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.39■■■□□ 2.78
Pcdhb5Q91XZ5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pcdhb5Q91XZ5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Pcdhb5Q91XZ5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Pcdhb5Q91XZ5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Pcdhb5Q91XZ5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Pcdhb5Q91XZ5 Zfp131-205ENSMUST00000223812 663 ntBASIC32.29■■■□□ 2.76
Pcdhb5Q91XZ5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pcdhb5Q91XZ5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Pcdhb5Q91XZ5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pcdhb5Q91XZ5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pcdhb5Q91XZ5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Pcdhb5Q91XZ5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Pcdhb5Q91XZ5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.09■■■□□ 2.73
Pcdhb5Q91XZ5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Pcdhb5Q91XZ5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.07■■■□□ 2.72
Pcdhb5Q91XZ5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Pcdhb5Q91XZ5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pcdhb5Q91XZ5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Pcdhb5Q91XZ5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pcdhb5Q91XZ5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Pcdhb5Q91XZ5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Pcdhb5Q91XZ5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Pcdhb5Q91XZ5 Gm16148-201ENSMUST00000119653 893 ntBASIC31.98■■■□□ 2.71
Pcdhb5Q91XZ5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.98■■■□□ 2.71
Pcdhb5Q91XZ5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcdhb5Q91XZ5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Pcdhb5Q91XZ5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Pcdhb5Q91XZ5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pcdhb5Q91XZ5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pcdhb5Q91XZ5 Peli2-204ENSMUST00000226513 1320 ntBASIC31.92■■■□□ 2.7
Pcdhb5Q91XZ5 Mipep-204ENSMUST00000225043 1548 ntBASIC31.91■■■□□ 2.7
Pcdhb5Q91XZ5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pcdhb5Q91XZ5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Pcdhb5Q91XZ5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Pcdhb5Q91XZ5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Pcdhb5Q91XZ5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pcdhb5Q91XZ5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Pcdhb5Q91XZ5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.84■■■□□ 2.69
Pcdhb5Q91XZ5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Pcdhb5Q91XZ5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.8■■■□□ 2.68
Pcdhb5Q91XZ5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pcdhb5Q91XZ5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms