Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pcdhgc5Q91XW9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pcdhgc5Q91XW9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.61■■■□□ 2.65
Pcdhgc5Q91XW9 Gm24804-201ENSMUST00000174982 85 ntBASIC31.61■■■□□ 2.65
Pcdhgc5Q91XW9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.59■■■□□ 2.65
Pcdhgc5Q91XW9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
Pcdhgc5Q91XW9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pcdhgc5Q91XW9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Pcdhgc5Q91XW9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Pcdhgc5Q91XW9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pcdhgc5Q91XW9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdhgc5Q91XW9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.49■■■□□ 2.63
Pcdhgc5Q91XW9 Gm27322-201ENSMUST00000184007 104 ntBASIC31.49■■■□□ 2.63
Pcdhgc5Q91XW9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Pcdhgc5Q91XW9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcdhgc5Q91XW9 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.41■■■□□ 2.62
Pcdhgc5Q91XW9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.38■■■□□ 2.61
Pcdhgc5Q91XW9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Pcdhgc5Q91XW9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcdhgc5Q91XW9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pcdhgc5Q91XW9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcdhgc5Q91XW9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pcdhgc5Q91XW9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pcdhgc5Q91XW9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pcdhgc5Q91XW9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.14■■■□□ 2.58
Pcdhgc5Q91XW9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pcdhgc5Q91XW9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pcdhgc5Q91XW9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pcdhgc5Q91XW9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pcdhgc5Q91XW9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pcdhgc5Q91XW9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.08■■■□□ 2.57
Pcdhgc5Q91XW9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pcdhgc5Q91XW9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Pcdhgc5Q91XW9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pcdhgc5Q91XW9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Pcdhgc5Q91XW9 Zfp131-205ENSMUST00000223812 663 ntBASIC30.93■■■□□ 2.54
Pcdhgc5Q91XW9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pcdhgc5Q91XW9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.91■■■□□ 2.54
Pcdhgc5Q91XW9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.91■■■□□ 2.54
Pcdhgc5Q91XW9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pcdhgc5Q91XW9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.9■■■□□ 2.54
Pcdhgc5Q91XW9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Pcdhgc5Q91XW9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pcdhgc5Q91XW9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pcdhgc5Q91XW9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pcdhgc5Q91XW9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.78■■■□□ 2.52
Pcdhgc5Q91XW9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Pcdhgc5Q91XW9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcdhgc5Q91XW9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcdhgc5Q91XW9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcdhgc5Q91XW9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Pcdhgc5Q91XW9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Pcdhgc5Q91XW9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pcdhgc5Q91XW9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcdhgc5Q91XW9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Pcdhgc5Q91XW9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Pcdhgc5Q91XW9 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.61■■■□□ 2.49
Pcdhgc5Q91XW9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Pcdhgc5Q91XW9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Pcdhgc5Q91XW9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.57■■■□□ 2.48
Pcdhgc5Q91XW9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Pcdhgc5Q91XW9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.53■■■□□ 2.48
Pcdhgc5Q91XW9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Pcdhgc5Q91XW9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.52■■■□□ 2.48
Pcdhgc5Q91XW9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pcdhgc5Q91XW9 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.48■■■□□ 2.47
Pcdhgc5Q91XW9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Pcdhgc5Q91XW9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Pcdhgc5Q91XW9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcdhgc5Q91XW9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Pcdhgc5Q91XW9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Pcdhgc5Q91XW9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Pcdhgc5Q91XW9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pcdhgc5Q91XW9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcdhgc5Q91XW9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcdhgc5Q91XW9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdhgc5Q91XW9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcdhgc5Q91XW9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcdhgc5Q91XW9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcdhgc5Q91XW9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Pcdhgc5Q91XW9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Pcdhgc5Q91XW9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhgc5Q91XW9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Pcdhgc5Q91XW9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pcdhgc5Q91XW9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Pcdhgc5Q91XW9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcdhgc5Q91XW9 Gm16148-201ENSMUST00000119653 893 ntBASIC30.14■■■□□ 2.42
Pcdhgc5Q91XW9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Pcdhgc5Q91XW9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Pcdhgc5Q91XW9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Pcdhgc5Q91XW9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcdhgc5Q91XW9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pcdhgc5Q91XW9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pcdhgc5Q91XW9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Pcdhgc5Q91XW9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pcdhgc5Q91XW9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pcdhgc5Q91XW9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
Pcdhgc5Q91XW9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Pcdhgc5Q91XW9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcdhgc5Q91XW9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms