Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tram1Q91V04 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tram1Q91V04 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Tram1Q91V04 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Tram1Q91V04 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tram1Q91V04 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tram1Q91V04 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tram1Q91V04 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.3■■□□□ 1.32
Tram1Q91V04 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tram1Q91V04 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tram1Q91V04 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tram1Q91V04 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.22■■□□□ 1.31
Tram1Q91V04 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.2■■□□□ 1.3
Tram1Q91V04 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tram1Q91V04 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tram1Q91V04 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Tram1Q91V04 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tram1Q91V04 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tram1Q91V04 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tram1Q91V04 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.15■■□□□ 1.3
Tram1Q91V04 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tram1Q91V04 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Tram1Q91V04 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tram1Q91V04 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.07■■□□□ 1.28
Tram1Q91V04 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tram1Q91V04 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.97■■□□□ 1.27
Tram1Q91V04 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.97■■□□□ 1.27
Tram1Q91V04 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tram1Q91V04 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Tram1Q91V04 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tram1Q91V04 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
Tram1Q91V04 Gm27325-201ENSMUST00000175467 74 ntBASIC22.85■■□□□ 1.25
Tram1Q91V04 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tram1Q91V04 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Tram1Q91V04 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tram1Q91V04 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tram1Q91V04 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.79■■□□□ 1.24
Tram1Q91V04 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tram1Q91V04 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tram1Q91V04 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tram1Q91V04 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tram1Q91V04 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tram1Q91V04 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tram1Q91V04 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Tram1Q91V04 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tram1Q91V04 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Tram1Q91V04 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tram1Q91V04 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tram1Q91V04 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tram1Q91V04 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tram1Q91V04 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tram1Q91V04 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.64■■□□□ 1.22
Tram1Q91V04 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tram1Q91V04 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tram1Q91V04 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tram1Q91V04 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tram1Q91V04 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tram1Q91V04 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.59■■□□□ 1.21
Tram1Q91V04 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tram1Q91V04 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tram1Q91V04 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tram1Q91V04 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tram1Q91V04 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Tram1Q91V04 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.57■■□□□ 1.2
Tram1Q91V04 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tram1Q91V04 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Tram1Q91V04 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tram1Q91V04 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Tram1Q91V04 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tram1Q91V04 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tram1Q91V04 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.46■■□□□ 1.19
Tram1Q91V04 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tram1Q91V04 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tram1Q91V04 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tram1Q91V04 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.41■■□□□ 1.18
Tram1Q91V04 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.41■■□□□ 1.18
Tram1Q91V04 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tram1Q91V04 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.4■■□□□ 1.18
Tram1Q91V04 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Tram1Q91V04 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tram1Q91V04 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tram1Q91V04 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tram1Q91V04 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tram1Q91V04 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tram1Q91V04 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.35■■□□□ 1.17
Tram1Q91V04 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Tram1Q91V04 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tram1Q91V04 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tram1Q91V04 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tram1Q91V04 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tram1Q91V04 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1Q91V04 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tram1Q91V04 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.29■■□□□ 1.16
Tram1Q91V04 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tram1Q91V04 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tram1Q91V04 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tram1Q91V04 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.25■■□□□ 1.15
Tram1Q91V04 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Tram1Q91V04 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tram1Q91V04 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms