Protein–RNA interactions for Protein: Q8R526

Pkd1l1, Polycystic kidney disease protein 1-like 1, mousemouse

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l1Q8R526 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pkd1l1Q8R526 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pkd1l1Q8R526 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.99■□□□□ 0.95
Pkd1l1Q8R526 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkd1l1Q8R526 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkd1l1Q8R526 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkd1l1Q8R526 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.91■□□□□ 0.94
Pkd1l1Q8R526 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.9■□□□□ 0.94
Pkd1l1Q8R526 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pkd1l1Q8R526 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.89■□□□□ 0.93
Pkd1l1Q8R526 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd1l1Q8R526 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd1l1Q8R526 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.86■□□□□ 0.93
Pkd1l1Q8R526 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.82■□□□□ 0.92
Pkd1l1Q8R526 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pkd1l1Q8R526 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.75■□□□□ 0.91
Pkd1l1Q8R526 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.74■□□□□ 0.91
Pkd1l1Q8R526 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pkd1l1Q8R526 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.74■□□□□ 0.91
Pkd1l1Q8R526 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l1Q8R526 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkd1l1Q8R526 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pkd1l1Q8R526 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pkd1l1Q8R526 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.65■□□□□ 0.9
Pkd1l1Q8R526 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pkd1l1Q8R526 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l1Q8R526 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pkd1l1Q8R526 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pkd1l1Q8R526 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pkd1l1Q8R526 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pkd1l1Q8R526 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pkd1l1Q8R526 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Pkd1l1Q8R526 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.52■□□□□ 0.87
Pkd1l1Q8R526 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.51■□□□□ 0.87
Pkd1l1Q8R526 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pkd1l1Q8R526 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pkd1l1Q8R526 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pkd1l1Q8R526 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.49■□□□□ 0.87
Pkd1l1Q8R526 Gm16148-201ENSMUST00000119653 893 ntBASIC20.48■□□□□ 0.87
Pkd1l1Q8R526 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd1l1Q8R526 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pkd1l1Q8R526 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pkd1l1Q8R526 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pkd1l1Q8R526 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pkd1l1Q8R526 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pkd1l1Q8R526 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pkd1l1Q8R526 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pkd1l1Q8R526 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pkd1l1Q8R526 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.36■□□□□ 0.85
Pkd1l1Q8R526 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l1Q8R526 Gm45855-201ENSMUST00000212546 880 ntBASIC20.34■□□□□ 0.85
Pkd1l1Q8R526 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l1Q8R526 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pkd1l1Q8R526 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.32■□□□□ 0.84
Pkd1l1Q8R526 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.32■□□□□ 0.84
Pkd1l1Q8R526 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd1l1Q8R526 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Pkd1l1Q8R526 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pkd1l1Q8R526 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pkd1l1Q8R526 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd1l1Q8R526 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd1l1Q8R526 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd1l1Q8R526 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pkd1l1Q8R526 Gm15039-201ENSMUST00000118914 875 ntBASIC20.22■□□□□ 0.83
Pkd1l1Q8R526 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd1l1Q8R526 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pkd1l1Q8R526 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.21■□□□□ 0.83
Pkd1l1Q8R526 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd1l1Q8R526 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l1Q8R526 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l1Q8R526 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pkd1l1Q8R526 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pkd1l1Q8R526 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pkd1l1Q8R526 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Pkd1l1Q8R526 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pkd1l1Q8R526 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.12■□□□□ 0.81
Pkd1l1Q8R526 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pkd1l1Q8R526 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pkd1l1Q8R526 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pkd1l1Q8R526 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pkd1l1Q8R526 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pkd1l1Q8R526 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pkd1l1Q8R526 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pkd1l1Q8R526 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pkd1l1Q8R526 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.05■□□□□ 0.8
Pkd1l1Q8R526 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l1Q8R526 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l1Q8R526 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pkd1l1Q8R526 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pkd1l1Q8R526 Gm9397-201ENSMUST00000200125 605 ntBASIC20.02■□□□□ 0.79
Pkd1l1Q8R526 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pkd1l1Q8R526 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20■□□□□ 0.79
Pkd1l1Q8R526 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Pkd1l1Q8R526 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pkd1l1Q8R526 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pkd1l1Q8R526 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pkd1l1Q8R526 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pkd1l1Q8R526 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.9■□□□□ 0.78
Pkd1l1Q8R526 Psd-208ENSMUST00000224556 2034 ntBASIC19.9■□□□□ 0.78
Pkd1l1Q8R526 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms