Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33.88■■■■□ 3.01
Tmc1Q8R4P5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Tmc1Q8R4P5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Tmc1Q8R4P5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Tmc1Q8R4P5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Tmc1Q8R4P5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Tmc1Q8R4P5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.73■■■□□ 2.99
Tmc1Q8R4P5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Tmc1Q8R4P5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Tmc1Q8R4P5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
Tmc1Q8R4P5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Tmc1Q8R4P5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Tmc1Q8R4P5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Tmc1Q8R4P5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Tmc1Q8R4P5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.46■■■□□ 2.95
Tmc1Q8R4P5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
Tmc1Q8R4P5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Tmc1Q8R4P5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.43■■■□□ 2.94
Tmc1Q8R4P5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
Tmc1Q8R4P5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Tmc1Q8R4P5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.34■■■□□ 2.93
Tmc1Q8R4P5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.34■■■□□ 2.93
Tmc1Q8R4P5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Tmc1Q8R4P5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC33.31■■■□□ 2.92
Tmc1Q8R4P5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Tmc1Q8R4P5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Tmc1Q8R4P5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Tmc1Q8R4P5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Tmc1Q8R4P5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Tmc1Q8R4P5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC33.21■■■□□ 2.91
Tmc1Q8R4P5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Tmc1Q8R4P5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.21■■■□□ 2.91
Tmc1Q8R4P5 Gm27325-201ENSMUST00000175467 74 ntBASIC33.2■■■□□ 2.91
Tmc1Q8R4P5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Tmc1Q8R4P5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Tmc1Q8R4P5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
Tmc1Q8R4P5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.09■■■□□ 2.89
Tmc1Q8R4P5 Gm25262-201ENSMUST00000174934 133 ntBASIC33.01■■■□□ 2.87
Tmc1Q8R4P5 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.92■■■□□ 2.86
Tmc1Q8R4P5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tmc1Q8R4P5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
Tmc1Q8R4P5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.84■■■□□ 2.85
Tmc1Q8R4P5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Tmc1Q8R4P5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Tmc1Q8R4P5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Tmc1Q8R4P5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Tmc1Q8R4P5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Tmc1Q8R4P5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Tmc1Q8R4P5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Tmc1Q8R4P5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Tmc1Q8R4P5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
Tmc1Q8R4P5 Rab21-202ENSMUST00000218831 843 ntBASIC32.68■■■□□ 2.82
Tmc1Q8R4P5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.68■■■□□ 2.82
Tmc1Q8R4P5 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.67■■■□□ 2.82
Tmc1Q8R4P5 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.66■■■□□ 2.82
Tmc1Q8R4P5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.64■■■□□ 2.82
Tmc1Q8R4P5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tmc1Q8R4P5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tmc1Q8R4P5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Tmc1Q8R4P5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Tmc1Q8R4P5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.6■■■□□ 2.81
Tmc1Q8R4P5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Tmc1Q8R4P5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Tmc1Q8R4P5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Tmc1Q8R4P5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Tmc1Q8R4P5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Tmc1Q8R4P5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.53■■■□□ 2.8
Tmc1Q8R4P5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Tmc1Q8R4P5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Tmc1Q8R4P5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Tmc1Q8R4P5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.47■■■□□ 2.79
Tmc1Q8R4P5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Tmc1Q8R4P5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Tmc1Q8R4P5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Tmc1Q8R4P5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Tmc1Q8R4P5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.37■■■□□ 2.77
Tmc1Q8R4P5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.36■■■□□ 2.77
Tmc1Q8R4P5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tmc1Q8R4P5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Tmc1Q8R4P5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Tmc1Q8R4P5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Tmc1Q8R4P5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Tmc1Q8R4P5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Tmc1Q8R4P5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Tmc1Q8R4P5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
Tmc1Q8R4P5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.24■■■□□ 2.75
Tmc1Q8R4P5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Tmc1Q8R4P5 Gm26115-201ENSMUST00000175605 87 ntBASIC32.24■■■□□ 2.75
Tmc1Q8R4P5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.23■■■□□ 2.75
Tmc1Q8R4P5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Tmc1Q8R4P5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Tmc1Q8R4P5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Tmc1Q8R4P5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.18■■■□□ 2.74
Tmc1Q8R4P5 Gm9905-201ENSMUST00000065740 1845 ntBASIC32.16■■■□□ 2.74
Tmc1Q8R4P5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
Tmc1Q8R4P5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tmc1Q8R4P5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tmc1Q8R4P5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Tmc1Q8R4P5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Tmc1Q8R4P5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms