Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33,88■■■■□ 3,01
Tmc1Q8R4P5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33,88■■■■□ 3,01
Tmc1Q8R4P5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33,86■■■■□ 3,01
Tmc1Q8R4P5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Tmc1Q8R4P5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Tmc1Q8R4P5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33,77■■■■□ 3
Tmc1Q8R4P5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33,73■■■□□ 2,99
Tmc1Q8R4P5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,72■■■□□ 2,99
Tmc1Q8R4P5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,67■■■□□ 2,98
Tmc1Q8R4P5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33,59■■■□□ 2,97
Tmc1Q8R4P5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC33,55■■■□□ 2,96
Tmc1Q8R4P5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33,51■■■□□ 2,95
Tmc1Q8R4P5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,49■■■□□ 2,95
Tmc1Q8R4P5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33,48■■■□□ 2,95
Tmc1Q8R4P5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33,46■■■□□ 2,95
Tmc1Q8R4P5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33,44■■■□□ 2,94
Tmc1Q8R4P5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33,43■■■□□ 2,94
Tmc1Q8R4P5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33,43■■■□□ 2,94
Tmc1Q8R4P5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,36■■■□□ 2,93
Tmc1Q8R4P5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33,35■■■□□ 2,93
Tmc1Q8R4P5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,34■■■□□ 2,93
Tmc1Q8R4P5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33,34■■■□□ 2,93
Tmc1Q8R4P5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33,33■■■□□ 2,93
Tmc1Q8R4P5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC33,31■■■□□ 2,92
Tmc1Q8R4P5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33,3■■■□□ 2,92
Tmc1Q8R4P5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33,29■■■□□ 2,92
Tmc1Q8R4P5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC33,27■■■□□ 2,92
Tmc1Q8R4P5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33,26■■■□□ 2,91
Tmc1Q8R4P5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33,22■■■□□ 2,91
Tmc1Q8R4P5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC33,21■■■□□ 2,91
Tmc1Q8R4P5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Tmc1Q8R4P5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33,21■■■□□ 2,91
Tmc1Q8R4P5 Gm27325-201ENSMUST00000175467 74 ntBASIC33,2■■■□□ 2,91
Tmc1Q8R4P5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Tmc1Q8R4P5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33,16■■■□□ 2,9
Tmc1Q8R4P5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC33,13■■■□□ 2,89
Tmc1Q8R4P5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,09■■■□□ 2,89
Tmc1Q8R4P5 Gm25262-201ENSMUST00000174934 133 ntBASIC33,01■■■□□ 2,87
Tmc1Q8R4P5 Gm2415-204ENSMUST00000190235 2004 ntBASIC32,92■■■□□ 2,86
Tmc1Q8R4P5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32,89■■■□□ 2,86
Tmc1Q8R4P5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32,87■■■□□ 2,85
Tmc1Q8R4P5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32,84■■■□□ 2,85
Tmc1Q8R4P5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32,78■■■□□ 2,84
Tmc1Q8R4P5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32,77■■■□□ 2,84
Tmc1Q8R4P5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
Tmc1Q8R4P5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
Tmc1Q8R4P5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Tmc1Q8R4P5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32,72■■■□□ 2,83
Tmc1Q8R4P5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32,7■■■□□ 2,83
Tmc1Q8R4P5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32,7■■■□□ 2,83
Tmc1Q8R4P5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32,7■■■□□ 2,82
Tmc1Q8R4P5 Rab21-202ENSMUST00000218831 843 ntBASIC32,68■■■□□ 2,82
Tmc1Q8R4P5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32,68■■■□□ 2,82
Tmc1Q8R4P5 Gm6658-202ENSMUST00000209493 1885 ntBASIC32,67■■■□□ 2,82
Tmc1Q8R4P5 Zfp131-207ENSMUST00000224946 1783 ntBASIC32,66■■■□□ 2,82
Tmc1Q8R4P5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32,64■■■□□ 2,82
Tmc1Q8R4P5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32,63■■■□□ 2,81
Tmc1Q8R4P5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Tmc1Q8R4P5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32,62■■■□□ 2,81
Tmc1Q8R4P5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32,62■■■□□ 2,81
Tmc1Q8R4P5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,6■■■□□ 2,81
Tmc1Q8R4P5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Tmc1Q8R4P5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Tmc1Q8R4P5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32,59■■■□□ 2,81
Tmc1Q8R4P5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32,56■■■□□ 2,8
Tmc1Q8R4P5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32,55■■■□□ 2,8
Tmc1Q8R4P5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,53■■■□□ 2,8
Tmc1Q8R4P5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32,52■■■□□ 2,8
Tmc1Q8R4P5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32,51■■■□□ 2,79
Tmc1Q8R4P5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32,51■■■□□ 2,79
Tmc1Q8R4P5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32,47■■■□□ 2,79
Tmc1Q8R4P5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32,47■■■□□ 2,79
Tmc1Q8R4P5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32,46■■■□□ 2,79
Tmc1Q8R4P5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32,44■■■□□ 2,78
Tmc1Q8R4P5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32,43■■■□□ 2,78
Tmc1Q8R4P5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,37■■■□□ 2,77
Tmc1Q8R4P5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32,36■■■□□ 2,77
Tmc1Q8R4P5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32,35■■■□□ 2,77
Tmc1Q8R4P5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,34■■■□□ 2,77
Tmc1Q8R4P5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32,34■■■□□ 2,77
Tmc1Q8R4P5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32,31■■■□□ 2,76
Tmc1Q8R4P5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,3■■■□□ 2,76
Tmc1Q8R4P5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32,29■■■□□ 2,76
Tmc1Q8R4P5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32,28■■■□□ 2,76
Tmc1Q8R4P5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,24■■■□□ 2,75
Tmc1Q8R4P5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32,24■■■□□ 2,75
Tmc1Q8R4P5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32,24■■■□□ 2,75
Tmc1Q8R4P5 Gm26115-201ENSMUST00000175605 87 ntBASIC32,24■■■□□ 2,75
Tmc1Q8R4P5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,23■■■□□ 2,75
Tmc1Q8R4P5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32,18■■■□□ 2,74
Tmc1Q8R4P5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32,18■■■□□ 2,74
Tmc1Q8R4P5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32,18■■■□□ 2,74
Tmc1Q8R4P5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32,18■■■□□ 2,74
Tmc1Q8R4P5 Gm9905-201ENSMUST00000065740 1845 ntBASIC32,16■■■□□ 2,74
Tmc1Q8R4P5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32,16■■■□□ 2,74
Tmc1Q8R4P5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Tmc1Q8R4P5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32,12■■■□□ 2,73
Tmc1Q8R4P5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32,12■■■□□ 2,73
Tmc1Q8R4P5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Tmc1Q8R4P5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms