Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Atp2a1Q8R429 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.44■■■□□ 2.62
Atp2a1Q8R429 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.4■■■□□ 2.62
Atp2a1Q8R429 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Atp2a1Q8R429 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
Atp2a1Q8R429 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.37■■■□□ 2.61
Atp2a1Q8R429 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Atp2a1Q8R429 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Atp2a1Q8R429 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Atp2a1Q8R429 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.27■■■□□ 2.6
Atp2a1Q8R429 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Atp2a1Q8R429 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Atp2a1Q8R429 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Atp2a1Q8R429 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Atp2a1Q8R429 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.06■■■□□ 2.56
Atp2a1Q8R429 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Atp2a1Q8R429 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atp2a1Q8R429 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Atp2a1Q8R429 Gm27322-201ENSMUST00000184007 104 ntBASIC30.99■■■□□ 2.55
Atp2a1Q8R429 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Atp2a1Q8R429 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Atp2a1Q8R429 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Atp2a1Q8R429 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Atp2a1Q8R429 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.84■■■□□ 2.53
Atp2a1Q8R429 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Atp2a1Q8R429 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Atp2a1Q8R429 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Atp2a1Q8R429 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Atp2a1Q8R429 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.69■■■□□ 2.5
Atp2a1Q8R429 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Atp2a1Q8R429 Gm24804-201ENSMUST00000174982 85 ntBASIC30.68■■■□□ 2.5
Atp2a1Q8R429 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Atp2a1Q8R429 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.65■■■□□ 2.5
Atp2a1Q8R429 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
Atp2a1Q8R429 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Atp2a1Q8R429 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Atp2a1Q8R429 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Atp2a1Q8R429 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.58■■■□□ 2.49
Atp2a1Q8R429 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.56■■■□□ 2.48
Atp2a1Q8R429 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Atp2a1Q8R429 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Atp2a1Q8R429 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Atp2a1Q8R429 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Atp2a1Q8R429 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.43■■■□□ 2.46
Atp2a1Q8R429 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Atp2a1Q8R429 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.42■■■□□ 2.46
Atp2a1Q8R429 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.41■■■□□ 2.46
Atp2a1Q8R429 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Atp2a1Q8R429 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Atp2a1Q8R429 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Atp2a1Q8R429 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Atp2a1Q8R429 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Atp2a1Q8R429 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Atp2a1Q8R429 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.23■■■□□ 2.43
Atp2a1Q8R429 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Atp2a1Q8R429 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atp2a1Q8R429 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Atp2a1Q8R429 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Atp2a1Q8R429 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Atp2a1Q8R429 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Atp2a1Q8R429 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
Atp2a1Q8R429 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Atp2a1Q8R429 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Atp2a1Q8R429 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Atp2a1Q8R429 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.09■■■□□ 2.41
Atp2a1Q8R429 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Atp2a1Q8R429 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Atp2a1Q8R429 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Atp2a1Q8R429 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Atp2a1Q8R429 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Atp2a1Q8R429 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Atp2a1Q8R429 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Atp2a1Q8R429 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Atp2a1Q8R429 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.99■■■□□ 2.39
Atp2a1Q8R429 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Atp2a1Q8R429 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Atp2a1Q8R429 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Atp2a1Q8R429 Zfp131-205ENSMUST00000223812 663 ntBASIC29.9■■■□□ 2.38
Atp2a1Q8R429 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Atp2a1Q8R429 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Atp2a1Q8R429 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Atp2a1Q8R429 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Atp2a1Q8R429 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Atp2a1Q8R429 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
Atp2a1Q8R429 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Atp2a1Q8R429 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Atp2a1Q8R429 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Atp2a1Q8R429 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Atp2a1Q8R429 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Atp2a1Q8R429 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Atp2a1Q8R429 Mipep-204ENSMUST00000225043 1548 ntBASIC29.71■■■□□ 2.35
Atp2a1Q8R429 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Atp2a1Q8R429 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.7■■■□□ 2.35
Atp2a1Q8R429 Peli2-204ENSMUST00000226513 1320 ntBASIC29.7■■■□□ 2.34
Atp2a1Q8R429 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Atp2a1Q8R429 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Atp2a1Q8R429 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Atp2a1Q8R429 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Atp2a1Q8R429 Gm16148-201ENSMUST00000119653 893 ntBASIC29.65■■■□□ 2.34
Atp2a1Q8R429 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 180.7 ms