Protein–RNA interactions for Protein: Q8R278

Vmn1r213, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r213Q8R278 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.55■■■□□ 2.32
Vmn1r213Q8R278 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Vmn1r213Q8R278 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Vmn1r213Q8R278 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.5■■■□□ 2.31
Vmn1r213Q8R278 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Vmn1r213Q8R278 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Vmn1r213Q8R278 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
Vmn1r213Q8R278 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.43■■■□□ 2.3
Vmn1r213Q8R278 Gm27322-201ENSMUST00000184007 104 ntBASIC29.4■■■□□ 2.3
Vmn1r213Q8R278 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Vmn1r213Q8R278 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.38■■■□□ 2.29
Vmn1r213Q8R278 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Vmn1r213Q8R278 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Vmn1r213Q8R278 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Vmn1r213Q8R278 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Vmn1r213Q8R278 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
Vmn1r213Q8R278 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Vmn1r213Q8R278 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.22■■■□□ 2.27
Vmn1r213Q8R278 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Vmn1r213Q8R278 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Vmn1r213Q8R278 Gm24804-201ENSMUST00000174982 85 ntBASIC29.12■■■□□ 2.25
Vmn1r213Q8R278 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.02■■■□□ 2.24
Vmn1r213Q8R278 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Vmn1r213Q8R278 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Vmn1r213Q8R278 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.98■■■□□ 2.23
Vmn1r213Q8R278 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Vmn1r213Q8R278 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Vmn1r213Q8R278 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Vmn1r213Q8R278 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.94■■■□□ 2.22
Vmn1r213Q8R278 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Vmn1r213Q8R278 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Vmn1r213Q8R278 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Vmn1r213Q8R278 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Vmn1r213Q8R278 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Vmn1r213Q8R278 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Vmn1r213Q8R278 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
Vmn1r213Q8R278 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Vmn1r213Q8R278 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Vmn1r213Q8R278 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.7■■■□□ 2.18
Vmn1r213Q8R278 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r213Q8R278 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r213Q8R278 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r213Q8R278 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.68■■■□□ 2.18
Vmn1r213Q8R278 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.68■■■□□ 2.18
Vmn1r213Q8R278 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Vmn1r213Q8R278 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Vmn1r213Q8R278 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Vmn1r213Q8R278 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Vmn1r213Q8R278 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Vmn1r213Q8R278 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Vmn1r213Q8R278 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Vmn1r213Q8R278 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Vmn1r213Q8R278 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Vmn1r213Q8R278 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vmn1r213Q8R278 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Vmn1r213Q8R278 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.54■■■□□ 2.16
Vmn1r213Q8R278 Zfp131-205ENSMUST00000223812 663 ntBASIC28.47■■■□□ 2.15
Vmn1r213Q8R278 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Vmn1r213Q8R278 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Vmn1r213Q8R278 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Vmn1r213Q8R278 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Vmn1r213Q8R278 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Vmn1r213Q8R278 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Vmn1r213Q8R278 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.33■■■□□ 2.13
Vmn1r213Q8R278 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.32■■■□□ 2.12
Vmn1r213Q8R278 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Vmn1r213Q8R278 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vmn1r213Q8R278 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.29■■■□□ 2.12
Vmn1r213Q8R278 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Vmn1r213Q8R278 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Vmn1r213Q8R278 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.2■■■□□ 2.1
Vmn1r213Q8R278 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Vmn1r213Q8R278 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vmn1r213Q8R278 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Vmn1r213Q8R278 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vmn1r213Q8R278 Gm16148-201ENSMUST00000119653 893 ntBASIC28.16■■■□□ 2.1
Vmn1r213Q8R278 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Vmn1r213Q8R278 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Vmn1r213Q8R278 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Vmn1r213Q8R278 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Vmn1r213Q8R278 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Vmn1r213Q8R278 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Vmn1r213Q8R278 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Vmn1r213Q8R278 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Vmn1r213Q8R278 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Vmn1r213Q8R278 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Vmn1r213Q8R278 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Vmn1r213Q8R278 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Vmn1r213Q8R278 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28■■■□□ 2.07
Vmn1r213Q8R278 Peli2-204ENSMUST00000226513 1320 ntBASIC27.97■■■□□ 2.07
Vmn1r213Q8R278 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Vmn1r213Q8R278 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Vmn1r213Q8R278 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Vmn1r213Q8R278 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Vmn1r213Q8R278 Mipep-204ENSMUST00000225043 1548 ntBASIC27.94■■■□□ 2.06
Vmn1r213Q8R278 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Vmn1r213Q8R278 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Vmn1r213Q8R278 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Vmn1r213Q8R278 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Vmn1r213Q8R278 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms