Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pdlim2Q8R1G6 Zxda-201ENSMUST00000117281 2621 ntBASIC32.17■■■□□ 2.74
Pdlim2Q8R1G6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pdlim2Q8R1G6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Pdlim2Q8R1G6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pdlim2Q8R1G6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pdlim2Q8R1G6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pdlim2Q8R1G6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pdlim2Q8R1G6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pdlim2Q8R1G6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdlim2Q8R1G6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pdlim2Q8R1G6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pdlim2Q8R1G6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Pdlim2Q8R1G6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pdlim2Q8R1G6 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.83■■■□□ 2.69
Pdlim2Q8R1G6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pdlim2Q8R1G6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pdlim2Q8R1G6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Pdlim2Q8R1G6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pdlim2Q8R1G6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pdlim2Q8R1G6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Pdlim2Q8R1G6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Pdlim2Q8R1G6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.74■■■□□ 2.67
Pdlim2Q8R1G6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pdlim2Q8R1G6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Pdlim2Q8R1G6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Pdlim2Q8R1G6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Pdlim2Q8R1G6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pdlim2Q8R1G6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Pdlim2Q8R1G6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pdlim2Q8R1G6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pdlim2Q8R1G6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pdlim2Q8R1G6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pdlim2Q8R1G6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pdlim2Q8R1G6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
Pdlim2Q8R1G6 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.58■■■□□ 2.65
Pdlim2Q8R1G6 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.56■■■□□ 2.64
Pdlim2Q8R1G6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.56■■■□□ 2.64
Pdlim2Q8R1G6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pdlim2Q8R1G6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pdlim2Q8R1G6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pdlim2Q8R1G6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pdlim2Q8R1G6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pdlim2Q8R1G6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pdlim2Q8R1G6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pdlim2Q8R1G6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.43■■■□□ 2.62
Pdlim2Q8R1G6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.4■■■□□ 2.62
Pdlim2Q8R1G6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pdlim2Q8R1G6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pdlim2Q8R1G6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pdlim2Q8R1G6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pdlim2Q8R1G6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.35■■■□□ 2.61
Pdlim2Q8R1G6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pdlim2Q8R1G6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pdlim2Q8R1G6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pdlim2Q8R1G6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pdlim2Q8R1G6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pdlim2Q8R1G6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pdlim2Q8R1G6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pdlim2Q8R1G6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Pdlim2Q8R1G6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pdlim2Q8R1G6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.21■■■□□ 2.59
Pdlim2Q8R1G6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pdlim2Q8R1G6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pdlim2Q8R1G6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Pdlim2Q8R1G6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pdlim2Q8R1G6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pdlim2Q8R1G6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pdlim2Q8R1G6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.12■■■□□ 2.57
Pdlim2Q8R1G6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.09■■■□□ 2.57
Pdlim2Q8R1G6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pdlim2Q8R1G6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pdlim2Q8R1G6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pdlim2Q8R1G6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pdlim2Q8R1G6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pdlim2Q8R1G6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Pdlim2Q8R1G6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Pdlim2Q8R1G6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.03■■■□□ 2.56
Pdlim2Q8R1G6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pdlim2Q8R1G6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Pdlim2Q8R1G6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.99■■■□□ 2.55
Pdlim2Q8R1G6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Pdlim2Q8R1G6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pdlim2Q8R1G6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.96■■■□□ 2.55
Pdlim2Q8R1G6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Pdlim2Q8R1G6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Pdlim2Q8R1G6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Pdlim2Q8R1G6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pdlim2Q8R1G6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Pdlim2Q8R1G6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pdlim2Q8R1G6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pdlim2Q8R1G6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pdlim2Q8R1G6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Pdlim2Q8R1G6 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.86■■■□□ 2.53
Pdlim2Q8R1G6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Pdlim2Q8R1G6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Pdlim2Q8R1G6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Pdlim2Q8R1G6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Pdlim2Q8R1G6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Pdlim2Q8R1G6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms