Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC43.57■■■■■ 4.57
Abca8bQ8K440 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC43.55■■■■■ 4.56
Abca8bQ8K440 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC43.54■■■■■ 4.56
Abca8bQ8K440 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC43.33■■■■■ 4.53
Abca8bQ8K440 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC43.33■■■■■ 4.53
Abca8bQ8K440 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC43.33■■■■■ 4.53
Abca8bQ8K440 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC43.3■■■■■ 4.52
Abca8bQ8K440 Zfp131-205ENSMUST00000223812 663 ntBASIC43.29■■■■■ 4.52
Abca8bQ8K440 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC43.28■■■■■ 4.52
Abca8bQ8K440 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC43.27■■■■■ 4.52
Abca8bQ8K440 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC43.25■■■■■ 4.51
Abca8bQ8K440 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC43.2■■■■■ 4.51
Abca8bQ8K440 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC43.19■■■■■ 4.5
Abca8bQ8K440 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC43.17■■■■■ 4.5
Abca8bQ8K440 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Abca8bQ8K440 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC43.09■■■■■ 4.49
Abca8bQ8K440 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
Abca8bQ8K440 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC42.99■■■■■ 4.47
Abca8bQ8K440 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC42.92■■■■■ 4.46
Abca8bQ8K440 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC42.88■■■■■ 4.45
Abca8bQ8K440 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC42.79■■■■■ 4.44
Abca8bQ8K440 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC42.78■■■■■ 4.44
Abca8bQ8K440 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
Abca8bQ8K440 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC42.75■■■■■ 4.43
Abca8bQ8K440 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC42.75■■■■■ 4.43
Abca8bQ8K440 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC42.75■■■■■ 4.43
Abca8bQ8K440 Gm42596-201ENSMUST00000196305 1958 ntBASIC42.75■■■■■ 4.43
Abca8bQ8K440 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC42.74■■■■■ 4.43
Abca8bQ8K440 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC42.68■■■■■ 4.42
Abca8bQ8K440 AC166822.3-201ENSMUST00000227394 661 ntBASIC42.68■■■■■ 4.42
Abca8bQ8K440 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC42.66■■■■■ 4.42
Abca8bQ8K440 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC42.64■■■■■ 4.42
Abca8bQ8K440 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
Abca8bQ8K440 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
Abca8bQ8K440 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC42.57■■■■■ 4.4
Abca8bQ8K440 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC42.52■■■■■ 4.4
Abca8bQ8K440 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC42.52■■■■■ 4.4
Abca8bQ8K440 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Abca8bQ8K440 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Abca8bQ8K440 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC42.47■■■■■ 4.39
Abca8bQ8K440 CT025624.2-201ENSMUST00000223609 1909 ntBASIC42.46■■■■■ 4.39
Abca8bQ8K440 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC42.46■■■■■ 4.39
Abca8bQ8K440 Gm10524-201ENSMUST00000181931 1893 ntBASIC42.45■■■■■ 4.39
Abca8bQ8K440 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC42.39■■■■■ 4.38
Abca8bQ8K440 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC42.38■■■■■ 4.38
Abca8bQ8K440 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC42.38■■■■■ 4.38
Abca8bQ8K440 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC42.35■■■■■ 4.37
Abca8bQ8K440 AL845457.1-201ENSMUST00000197244 68 ntBASIC42.33■■■■■ 4.37
Abca8bQ8K440 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC42.31■■■■■ 4.36
Abca8bQ8K440 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC42.29■■■■■ 4.36
Abca8bQ8K440 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
Abca8bQ8K440 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC42.22■■■■■ 4.35
Abca8bQ8K440 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC42.21■■■■■ 4.35
Abca8bQ8K440 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC42.16■■■■■ 4.34
Abca8bQ8K440 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC42.15■■■■■ 4.34
Abca8bQ8K440 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC42.14■■■■■ 4.34
Abca8bQ8K440 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC42.14■■■■■ 4.34
Abca8bQ8K440 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC42.08■■■■■ 4.33
Abca8bQ8K440 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC42.07■■■■■ 4.33
Abca8bQ8K440 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC42.06■■■■■ 4.32
Abca8bQ8K440 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC42.04■■■■■ 4.32
Abca8bQ8K440 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC41.99■■■■■ 4.31
Abca8bQ8K440 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC41.98■■■■■ 4.31
Abca8bQ8K440 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
Abca8bQ8K440 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC41.89■■■■■ 4.3
Abca8bQ8K440 Gm16148-201ENSMUST00000119653 893 ntBASIC41.88■■■■■ 4.3
Abca8bQ8K440 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC41.86■■■■■ 4.29
Abca8bQ8K440 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC41.85■■■■■ 4.29
Abca8bQ8K440 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC41.83■■■■■ 4.29
Abca8bQ8K440 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC41.83■■■■■ 4.29
Abca8bQ8K440 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC41.76■■■■■ 4.28
Abca8bQ8K440 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC41.74■■■■■ 4.27
Abca8bQ8K440 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC41.74■■■■■ 4.27
Abca8bQ8K440 Tdp2-203ENSMUST00000223804 1136 ntBASIC41.7■■■■■ 4.27
Abca8bQ8K440 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC41.68■■■■■ 4.26
Abca8bQ8K440 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC41.59■■■■■ 4.25
Abca8bQ8K440 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC41.59■■■■■ 4.25
Abca8bQ8K440 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC41.58■■■■■ 4.25
Abca8bQ8K440 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC41.57■■■■■ 4.24
Abca8bQ8K440 Peli2-204ENSMUST00000226513 1320 ntBASIC41.55■■■■■ 4.24
Abca8bQ8K440 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
Abca8bQ8K440 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC41.52■■■■■ 4.24
Abca8bQ8K440 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC41.51■■■■■ 4.24
Abca8bQ8K440 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC41.51■■■■■ 4.23
Abca8bQ8K440 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
Abca8bQ8K440 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC41.48■■■■■ 4.23
Abca8bQ8K440 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC41.47■■■■■ 4.23
Abca8bQ8K440 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
Abca8bQ8K440 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC41.47■■■■■ 4.23
Abca8bQ8K440 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC41.46■■■■■ 4.23
Abca8bQ8K440 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC41.46■■■■■ 4.23
Abca8bQ8K440 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC41.44■■■■■ 4.22
Abca8bQ8K440 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC41.4■■■■■ 4.22
Abca8bQ8K440 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
Abca8bQ8K440 Zfp131-207ENSMUST00000224946 1783 ntBASIC41.39■■■■■ 4.22
Abca8bQ8K440 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
Abca8bQ8K440 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
Abca8bQ8K440 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
Abca8bQ8K440 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC41.29■■■■■ 4.2
Abca8bQ8K440 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC41.28■■■■■ 4.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms