Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Rtn4rl1Q8K0S5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn4rl1Q8K0S5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
Rtn4rl1Q8K0S5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn4rl1Q8K0S5 Gm27322-201ENSMUST00000184007 104 ntBASIC29.14■■■□□ 2.26
Rtn4rl1Q8K0S5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.14■■■□□ 2.26
Rtn4rl1Q8K0S5 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.12■■■□□ 2.25
Rtn4rl1Q8K0S5 Gm24804-201ENSMUST00000174982 85 ntBASIC29.09■■■□□ 2.25
Rtn4rl1Q8K0S5 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.08■■■□□ 2.25
Rtn4rl1Q8K0S5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rtn4rl1Q8K0S5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.04■■■□□ 2.24
Rtn4rl1Q8K0S5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rtn4rl1Q8K0S5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Rtn4rl1Q8K0S5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rtn4rl1Q8K0S5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rtn4rl1Q8K0S5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.88■■■□□ 2.21
Rtn4rl1Q8K0S5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rtn4rl1Q8K0S5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Rtn4rl1Q8K0S5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtn4rl1Q8K0S5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtn4rl1Q8K0S5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rtn4rl1Q8K0S5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.69■■■□□ 2.18
Rtn4rl1Q8K0S5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rtn4rl1Q8K0S5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rtn4rl1Q8K0S5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Rtn4rl1Q8K0S5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.57■■■□□ 2.16
Rtn4rl1Q8K0S5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Rtn4rl1Q8K0S5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rtn4rl1Q8K0S5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.55■■■□□ 2.16
Rtn4rl1Q8K0S5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rtn4rl1Q8K0S5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rtn4rl1Q8K0S5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rtn4rl1Q8K0S5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtn4rl1Q8K0S5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtn4rl1Q8K0S5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rtn4rl1Q8K0S5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtn4rl1Q8K0S5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.44■■■□□ 2.14
Rtn4rl1Q8K0S5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtn4rl1Q8K0S5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtn4rl1Q8K0S5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtn4rl1Q8K0S5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Rtn4rl1Q8K0S5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rtn4rl1Q8K0S5 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.4■■■□□ 2.14
Rtn4rl1Q8K0S5 Zfp131-205ENSMUST00000223812 663 ntBASIC28.38■■■□□ 2.13
Rtn4rl1Q8K0S5 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.35■■■□□ 2.13
Rtn4rl1Q8K0S5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn4rl1Q8K0S5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rtn4rl1Q8K0S5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Rtn4rl1Q8K0S5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rtn4rl1Q8K0S5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn4rl1Q8K0S5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn4rl1Q8K0S5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rtn4rl1Q8K0S5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.2■■■□□ 2.1
Rtn4rl1Q8K0S5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Rtn4rl1Q8K0S5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Rtn4rl1Q8K0S5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtn4rl1Q8K0S5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtn4rl1Q8K0S5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtn4rl1Q8K0S5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.07■■■□□ 2.08
Rtn4rl1Q8K0S5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rtn4rl1Q8K0S5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtn4rl1Q8K0S5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn4rl1Q8K0S5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn4rl1Q8K0S5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn4rl1Q8K0S5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn4rl1Q8K0S5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Rtn4rl1Q8K0S5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rtn4rl1Q8K0S5 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.96■■■□□ 2.07
Rtn4rl1Q8K0S5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Rtn4rl1Q8K0S5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rtn4rl1Q8K0S5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.9■■■□□ 2.06
Rtn4rl1Q8K0S5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Rtn4rl1Q8K0S5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rtn4rl1Q8K0S5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rtn4rl1Q8K0S5 Gm16148-201ENSMUST00000119653 893 ntBASIC27.87■■■□□ 2.05
Rtn4rl1Q8K0S5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rtn4rl1Q8K0S5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rtn4rl1Q8K0S5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtn4rl1Q8K0S5 Peli2-204ENSMUST00000226513 1320 ntBASIC27.79■■■□□ 2.04
Rtn4rl1Q8K0S5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rtn4rl1Q8K0S5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rtn4rl1Q8K0S5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rtn4rl1Q8K0S5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rtn4rl1Q8K0S5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Rtn4rl1Q8K0S5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rtn4rl1Q8K0S5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rtn4rl1Q8K0S5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rtn4rl1Q8K0S5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rtn4rl1Q8K0S5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Rtn4rl1Q8K0S5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
Rtn4rl1Q8K0S5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtn4rl1Q8K0S5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Rtn4rl1Q8K0S5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.65■■■□□ 2.02
Rtn4rl1Q8K0S5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.63■■■□□ 2.01
Rtn4rl1Q8K0S5 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.63■■■□□ 2.01
Rtn4rl1Q8K0S5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Rtn4rl1Q8K0S5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Rtn4rl1Q8K0S5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Rtn4rl1Q8K0S5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rtn4rl1Q8K0S5 Mipep-204ENSMUST00000225043 1548 ntBASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms