Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Kdm1bQ8CIG3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Kdm1bQ8CIG3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Kdm1bQ8CIG3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Kdm1bQ8CIG3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.91■■■□□ 2.22
Kdm1bQ8CIG3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Kdm1bQ8CIG3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Kdm1bQ8CIG3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.81■■■□□ 2.2
Kdm1bQ8CIG3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Kdm1bQ8CIG3 Rab21-202ENSMUST00000218831 843 ntBASIC28.73■■■□□ 2.19
Kdm1bQ8CIG3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Kdm1bQ8CIG3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Kdm1bQ8CIG3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm1bQ8CIG3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Kdm1bQ8CIG3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm1bQ8CIG3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Kdm1bQ8CIG3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.55■■■□□ 2.16
Kdm1bQ8CIG3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
Kdm1bQ8CIG3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Kdm1bQ8CIG3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Kdm1bQ8CIG3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.53■■■□□ 2.16
Kdm1bQ8CIG3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Kdm1bQ8CIG3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Kdm1bQ8CIG3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm1bQ8CIG3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm1bQ8CIG3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm1bQ8CIG3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm1bQ8CIG3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.41■■■□□ 2.14
Kdm1bQ8CIG3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Kdm1bQ8CIG3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm1bQ8CIG3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.38■■■□□ 2.13
Kdm1bQ8CIG3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm1bQ8CIG3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm1bQ8CIG3 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.37■■■□□ 2.13
Kdm1bQ8CIG3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Kdm1bQ8CIG3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm1bQ8CIG3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Kdm1bQ8CIG3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.34■■■□□ 2.13
Kdm1bQ8CIG3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Kdm1bQ8CIG3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm1bQ8CIG3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Kdm1bQ8CIG3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Kdm1bQ8CIG3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm1bQ8CIG3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm1bQ8CIG3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm1bQ8CIG3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm1bQ8CIG3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Kdm1bQ8CIG3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Kdm1bQ8CIG3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Kdm1bQ8CIG3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.13■■■□□ 2.09
Kdm1bQ8CIG3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Kdm1bQ8CIG3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Kdm1bQ8CIG3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.1■■■□□ 2.09
Kdm1bQ8CIG3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.07■■■□□ 2.08
Kdm1bQ8CIG3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Kdm1bQ8CIG3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm1bQ8CIG3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Kdm1bQ8CIG3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Kdm1bQ8CIG3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm1bQ8CIG3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Kdm1bQ8CIG3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm1bQ8CIG3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Kdm1bQ8CIG3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Kdm1bQ8CIG3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Kdm1bQ8CIG3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm1bQ8CIG3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Kdm1bQ8CIG3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm1bQ8CIG3 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.77■■■□□ 2.04
Kdm1bQ8CIG3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm1bQ8CIG3 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.74■■■□□ 2.03
Kdm1bQ8CIG3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Kdm1bQ8CIG3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm1bQ8CIG3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Kdm1bQ8CIG3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Kdm1bQ8CIG3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm1bQ8CIG3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm1bQ8CIG3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.66■■■□□ 2.02
Kdm1bQ8CIG3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
Kdm1bQ8CIG3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.62■■■□□ 2.01
Kdm1bQ8CIG3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.6■■■□□ 2.01
Kdm1bQ8CIG3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Kdm1bQ8CIG3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Kdm1bQ8CIG3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm1bQ8CIG3 Mipep-204ENSMUST00000225043 1548 ntBASIC27.57■■■□□ 2
Kdm1bQ8CIG3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Kdm1bQ8CIG3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Kdm1bQ8CIG3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Kdm1bQ8CIG3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Kdm1bQ8CIG3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Kdm1bQ8CIG3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Kdm1bQ8CIG3 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.51■■□□□ 1.99
Kdm1bQ8CIG3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Kdm1bQ8CIG3 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.49■■□□□ 1.99
Kdm1bQ8CIG3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Kdm1bQ8CIG3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.45■■□□□ 1.98
Kdm1bQ8CIG3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.44■■□□□ 1.98
Kdm1bQ8CIG3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Kdm1bQ8CIG3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.41■■□□□ 1.98
Kdm1bQ8CIG3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Kdm1bQ8CIG3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms