Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sox30Q8CGW4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.63■■■□□ 2.49
Sox30Q8CGW4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Sox30Q8CGW4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Sox30Q8CGW4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sox30Q8CGW4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sox30Q8CGW4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Sox30Q8CGW4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sox30Q8CGW4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.41■■■□□ 2.46
Sox30Q8CGW4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sox30Q8CGW4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.38■■■□□ 2.45
Sox30Q8CGW4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Sox30Q8CGW4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sox30Q8CGW4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Sox30Q8CGW4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Sox30Q8CGW4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sox30Q8CGW4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Sox30Q8CGW4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.27■■■□□ 2.44
Sox30Q8CGW4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Sox30Q8CGW4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Sox30Q8CGW4 Gm25238-201ENSMUST00000174914 89 ntBASIC30.17■■■□□ 2.42
Sox30Q8CGW4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Sox30Q8CGW4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.15■■■□□ 2.42
Sox30Q8CGW4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Sox30Q8CGW4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Sox30Q8CGW4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sox30Q8CGW4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Sox30Q8CGW4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Sox30Q8CGW4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Sox30Q8CGW4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sox30Q8CGW4 Zfp131-207ENSMUST00000224946 1783 ntBASIC30■■■□□ 2.39
Sox30Q8CGW4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30■■■□□ 2.39
Sox30Q8CGW4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.96■■■□□ 2.39
Sox30Q8CGW4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Sox30Q8CGW4 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.91■■■□□ 2.38
Sox30Q8CGW4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.91■■■□□ 2.38
Sox30Q8CGW4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Sox30Q8CGW4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Sox30Q8CGW4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Sox30Q8CGW4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Sox30Q8CGW4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sox30Q8CGW4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sox30Q8CGW4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.8■■■□□ 2.36
Sox30Q8CGW4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Sox30Q8CGW4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.77■■■□□ 2.36
Sox30Q8CGW4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Sox30Q8CGW4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Sox30Q8CGW4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Sox30Q8CGW4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
Sox30Q8CGW4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sox30Q8CGW4 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.66■■■□□ 2.34
Sox30Q8CGW4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Sox30Q8CGW4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.64■■■□□ 2.34
Sox30Q8CGW4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Sox30Q8CGW4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.61■■■□□ 2.33
Sox30Q8CGW4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Sox30Q8CGW4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Sox30Q8CGW4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.57■■■□□ 2.32
Sox30Q8CGW4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Sox30Q8CGW4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Sox30Q8CGW4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Sox30Q8CGW4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.49■■■□□ 2.31
Sox30Q8CGW4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Sox30Q8CGW4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Sox30Q8CGW4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.45■■■□□ 2.31
Sox30Q8CGW4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Sox30Q8CGW4 Rab21-202ENSMUST00000218831 843 ntBASIC29.45■■■□□ 2.31
Sox30Q8CGW4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.44■■■□□ 2.3
Sox30Q8CGW4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Sox30Q8CGW4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Sox30Q8CGW4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Sox30Q8CGW4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.38■■■□□ 2.29
Sox30Q8CGW4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sox30Q8CGW4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Sox30Q8CGW4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Sox30Q8CGW4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
Sox30Q8CGW4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Sox30Q8CGW4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
Sox30Q8CGW4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Sox30Q8CGW4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.28■■■□□ 2.28
Sox30Q8CGW4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Sox30Q8CGW4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Sox30Q8CGW4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Sox30Q8CGW4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Sox30Q8CGW4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Sox30Q8CGW4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Sox30Q8CGW4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Sox30Q8CGW4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Sox30Q8CGW4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Sox30Q8CGW4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.18■■■□□ 2.26
Sox30Q8CGW4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Sox30Q8CGW4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sox30Q8CGW4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Sox30Q8CGW4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Sox30Q8CGW4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Sox30Q8CGW4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Sox30Q8CGW4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.09■■■□□ 2.25
Sox30Q8CGW4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Sox30Q8CGW4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Sox30Q8CGW4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms