Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ShfQ8CG80 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ShfQ8CG80 Gm25238-201ENSMUST00000174914 89 ntBASIC24.66■■□□□ 1.54
ShfQ8CG80 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.61■■□□□ 1.53
ShfQ8CG80 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ShfQ8CG80 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ShfQ8CG80 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.58■■□□□ 1.53
ShfQ8CG80 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.57■■□□□ 1.52
ShfQ8CG80 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ShfQ8CG80 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ShfQ8CG80 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.53■■□□□ 1.52
ShfQ8CG80 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ShfQ8CG80 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ShfQ8CG80 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
ShfQ8CG80 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.45■■□□□ 1.51
ShfQ8CG80 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ShfQ8CG80 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ShfQ8CG80 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ShfQ8CG80 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ShfQ8CG80 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.34■■□□□ 1.49
ShfQ8CG80 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ShfQ8CG80 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ShfQ8CG80 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
ShfQ8CG80 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ShfQ8CG80 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ShfQ8CG80 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
ShfQ8CG80 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
ShfQ8CG80 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ShfQ8CG80 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.21■■□□□ 1.47
ShfQ8CG80 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.21■■□□□ 1.47
ShfQ8CG80 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
ShfQ8CG80 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ShfQ8CG80 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ShfQ8CG80 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ShfQ8CG80 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.11■■□□□ 1.45
ShfQ8CG80 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ShfQ8CG80 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
ShfQ8CG80 Rab21-202ENSMUST00000218831 843 ntBASIC24.04■■□□□ 1.44
ShfQ8CG80 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShfQ8CG80 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShfQ8CG80 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShfQ8CG80 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ShfQ8CG80 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShfQ8CG80 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShfQ8CG80 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.97■■□□□ 1.43
ShfQ8CG80 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ShfQ8CG80 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ShfQ8CG80 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.94■■□□□ 1.42
ShfQ8CG80 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ShfQ8CG80 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.93■■□□□ 1.42
ShfQ8CG80 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ShfQ8CG80 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ShfQ8CG80 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ShfQ8CG80 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.89■■□□□ 1.41
ShfQ8CG80 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ShfQ8CG80 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ShfQ8CG80 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.85■■□□□ 1.41
ShfQ8CG80 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ShfQ8CG80 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
ShfQ8CG80 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ShfQ8CG80 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.8■■□□□ 1.4
ShfQ8CG80 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ShfQ8CG80 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ShfQ8CG80 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShfQ8CG80 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShfQ8CG80 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.73■■□□□ 1.39
ShfQ8CG80 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShfQ8CG80 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShfQ8CG80 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ShfQ8CG80 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
ShfQ8CG80 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.7■■□□□ 1.38
ShfQ8CG80 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ShfQ8CG80 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ShfQ8CG80 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ShfQ8CG80 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ShfQ8CG80 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.66■■□□□ 1.38
ShfQ8CG80 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ShfQ8CG80 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
ShfQ8CG80 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ShfQ8CG80 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ShfQ8CG80 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ShfQ8CG80 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.6■■□□□ 1.37
ShfQ8CG80 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.59■■□□□ 1.37
ShfQ8CG80 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ShfQ8CG80 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ShfQ8CG80 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ShfQ8CG80 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ShfQ8CG80 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ShfQ8CG80 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ShfQ8CG80 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ShfQ8CG80 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ShfQ8CG80 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ShfQ8CG80 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ShfQ8CG80 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ShfQ8CG80 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.47■■□□□ 1.35
ShfQ8CG80 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.47■■□□□ 1.35
ShfQ8CG80 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ShfQ8CG80 Mipep-204ENSMUST00000225043 1548 ntBASIC23.43■■□□□ 1.34
ShfQ8CG80 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ShfQ8CG80 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms