Protein–RNA interactions for Protein: Q8CG65

Sspo, SCO-spondin, mousemouse

Predictions only

Length 4,998 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspoQ8CG65 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SspoQ8CG65 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SspoQ8CG65 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SspoQ8CG65 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SspoQ8CG65 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.73□□□□□ -0.21
SspoQ8CG65 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SspoQ8CG65 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC13.72□□□□□ -0.21
SspoQ8CG65 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SspoQ8CG65 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SspoQ8CG65 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SspoQ8CG65 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SspoQ8CG65 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SspoQ8CG65 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SspoQ8CG65 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SspoQ8CG65 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SspoQ8CG65 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SspoQ8CG65 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.64□□□□□ -0.23
SspoQ8CG65 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.63□□□□□ -0.23
SspoQ8CG65 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SspoQ8CG65 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC13.61□□□□□ -0.23
SspoQ8CG65 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SspoQ8CG65 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SspoQ8CG65 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.53□□□□□ -0.24
SspoQ8CG65 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SspoQ8CG65 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.51□□□□□ -0.25
SspoQ8CG65 AC166822.3-201ENSMUST00000227394 661 ntBASIC13.51□□□□□ -0.25
SspoQ8CG65 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SspoQ8CG65 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SspoQ8CG65 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SspoQ8CG65 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.47□□□□□ -0.25
SspoQ8CG65 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.47□□□□□ -0.25
SspoQ8CG65 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SspoQ8CG65 Psd-208ENSMUST00000224556 2034 ntBASIC13.46□□□□□ -0.26
SspoQ8CG65 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SspoQ8CG65 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SspoQ8CG65 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SspoQ8CG65 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SspoQ8CG65 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC13.42□□□□□ -0.26
SspoQ8CG65 Tdp2-203ENSMUST00000223804 1136 ntBASIC13.42□□□□□ -0.26
SspoQ8CG65 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SspoQ8CG65 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SspoQ8CG65 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC13.38□□□□□ -0.27
SspoQ8CG65 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SspoQ8CG65 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspoQ8CG65 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspoQ8CG65 Gm16148-201ENSMUST00000119653 893 ntBASIC13.36□□□□□ -0.27
SspoQ8CG65 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SspoQ8CG65 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SspoQ8CG65 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.33□□□□□ -0.28
SspoQ8CG65 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SspoQ8CG65 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SspoQ8CG65 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SspoQ8CG65 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SspoQ8CG65 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SspoQ8CG65 Gm45855-201ENSMUST00000212546 880 ntBASIC13.31□□□□□ -0.28
SspoQ8CG65 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SspoQ8CG65 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SspoQ8CG65 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspoQ8CG65 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspoQ8CG65 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspoQ8CG65 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SspoQ8CG65 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspoQ8CG65 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SspoQ8CG65 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SspoQ8CG65 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SspoQ8CG65 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SspoQ8CG65 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC13.24□□□□□ -0.29
SspoQ8CG65 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspoQ8CG65 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SspoQ8CG65 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.23□□□□□ -0.29
SspoQ8CG65 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SspoQ8CG65 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SspoQ8CG65 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.21□□□□□ -0.29
SspoQ8CG65 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
SspoQ8CG65 AL845457.1-201ENSMUST00000197244 68 ntBASIC13.2□□□□□ -0.3
SspoQ8CG65 Gm9397-201ENSMUST00000200125 605 ntBASIC13.2□□□□□ -0.3
SspoQ8CG65 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SspoQ8CG65 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SspoQ8CG65 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SspoQ8CG65 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SspoQ8CG65 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SspoQ8CG65 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SspoQ8CG65 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SspoQ8CG65 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SspoQ8CG65 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SspoQ8CG65 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SspoQ8CG65 Peli2-204ENSMUST00000226513 1320 ntBASIC13.14□□□□□ -0.31
SspoQ8CG65 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SspoQ8CG65 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.14□□□□□ -0.31
SspoQ8CG65 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SspoQ8CG65 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC13.13□□□□□ -0.31
SspoQ8CG65 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SspoQ8CG65 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.12□□□□□ -0.31
SspoQ8CG65 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SspoQ8CG65 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC13.12□□□□□ -0.31
SspoQ8CG65 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SspoQ8CG65 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SspoQ8CG65 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspoQ8CG65 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspoQ8CG65 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms