Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.65■■■□□ 2.02
Rab43Q8CG50 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rab43Q8CG50 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.58■■■□□ 2.01
Rab43Q8CG50 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rab43Q8CG50 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rab43Q8CG50 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.51■■■□□ 2
Rab43Q8CG50 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.51■■■□□ 2
Rab43Q8CG50 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rab43Q8CG50 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rab43Q8CG50 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
Rab43Q8CG50 Gm27322-201ENSMUST00000184007 104 ntBASIC27.47■■□□□ 1.99
Rab43Q8CG50 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.44■■□□□ 1.98
Rab43Q8CG50 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rab43Q8CG50 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Rab43Q8CG50 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rab43Q8CG50 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rab43Q8CG50 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.28■■□□□ 1.96
Rab43Q8CG50 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rab43Q8CG50 Gm24804-201ENSMUST00000174982 85 ntBASIC27.21■■□□□ 1.95
Rab43Q8CG50 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rab43Q8CG50 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rab43Q8CG50 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rab43Q8CG50 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.11■■□□□ 1.93
Rab43Q8CG50 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.1■■□□□ 1.93
Rab43Q8CG50 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rab43Q8CG50 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rab43Q8CG50 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.03■■□□□ 1.92
Rab43Q8CG50 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rab43Q8CG50 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rab43Q8CG50 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Rab43Q8CG50 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rab43Q8CG50 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Rab43Q8CG50 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rab43Q8CG50 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rab43Q8CG50 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rab43Q8CG50 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.85■■□□□ 1.89
Rab43Q8CG50 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.81■■□□□ 1.88
Rab43Q8CG50 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rab43Q8CG50 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rab43Q8CG50 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.78■■□□□ 1.88
Rab43Q8CG50 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rab43Q8CG50 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rab43Q8CG50 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Rab43Q8CG50 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rab43Q8CG50 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Rab43Q8CG50 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rab43Q8CG50 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rab43Q8CG50 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rab43Q8CG50 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rab43Q8CG50 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rab43Q8CG50 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rab43Q8CG50 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.65■■□□□ 1.86
Rab43Q8CG50 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Rab43Q8CG50 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rab43Q8CG50 Zfp131-205ENSMUST00000223812 663 ntBASIC26.6■■□□□ 1.85
Rab43Q8CG50 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rab43Q8CG50 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rab43Q8CG50 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rab43Q8CG50 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Rab43Q8CG50 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Rab43Q8CG50 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.47■■□□□ 1.83
Rab43Q8CG50 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rab43Q8CG50 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Rab43Q8CG50 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rab43Q8CG50 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rab43Q8CG50 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Rab43Q8CG50 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rab43Q8CG50 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rab43Q8CG50 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rab43Q8CG50 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.37■■□□□ 1.81
Rab43Q8CG50 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Rab43Q8CG50 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rab43Q8CG50 Gm16148-201ENSMUST00000119653 893 ntBASIC26.32■■□□□ 1.8
Rab43Q8CG50 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.3■■□□□ 1.8
Rab43Q8CG50 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rab43Q8CG50 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rab43Q8CG50 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rab43Q8CG50 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Rab43Q8CG50 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rab43Q8CG50 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rab43Q8CG50 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rab43Q8CG50 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rab43Q8CG50 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.2■■□□□ 1.78
Rab43Q8CG50 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Rab43Q8CG50 Peli2-204ENSMUST00000226513 1320 ntBASIC26.17■■□□□ 1.78
Rab43Q8CG50 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Rab43Q8CG50 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rab43Q8CG50 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Rab43Q8CG50 Mipep-204ENSMUST00000225043 1548 ntBASIC26.12■■□□□ 1.77
Rab43Q8CG50 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rab43Q8CG50 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rab43Q8CG50 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rab43Q8CG50 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.1■■□□□ 1.77
Rab43Q8CG50 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab43Q8CG50 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rab43Q8CG50 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rab43Q8CG50 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
Rab43Q8CG50 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rab43Q8CG50 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rab43Q8CG50 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms