Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
Ptcd1Q8C2E4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34.81■■■■□ 3.16
Ptcd1Q8C2E4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
Ptcd1Q8C2E4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ptcd1Q8C2E4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.77■■■■□ 3.16
Ptcd1Q8C2E4 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.71■■■■□ 3.15
Ptcd1Q8C2E4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.7■■■■□ 3.14
Ptcd1Q8C2E4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Ptcd1Q8C2E4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ptcd1Q8C2E4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC34.65■■■■□ 3.14
Ptcd1Q8C2E4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Ptcd1Q8C2E4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Ptcd1Q8C2E4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Ptcd1Q8C2E4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
Ptcd1Q8C2E4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ptcd1Q8C2E4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ptcd1Q8C2E4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ptcd1Q8C2E4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ptcd1Q8C2E4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ptcd1Q8C2E4 Zfp131-205ENSMUST00000223812 663 ntBASIC34.46■■■■□ 3.11
Ptcd1Q8C2E4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ptcd1Q8C2E4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Ptcd1Q8C2E4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ptcd1Q8C2E4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Ptcd1Q8C2E4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Ptcd1Q8C2E4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ptcd1Q8C2E4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ptcd1Q8C2E4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.25■■■■□ 3.07
Ptcd1Q8C2E4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34.25■■■■□ 3.07
Ptcd1Q8C2E4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
Ptcd1Q8C2E4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC34.23■■■■□ 3.07
Ptcd1Q8C2E4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Ptcd1Q8C2E4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Ptcd1Q8C2E4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.15■■■■□ 3.06
Ptcd1Q8C2E4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Ptcd1Q8C2E4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
Ptcd1Q8C2E4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Ptcd1Q8C2E4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC34.1■■■■□ 3.05
Ptcd1Q8C2E4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Ptcd1Q8C2E4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.06■■■■□ 3.04
Ptcd1Q8C2E4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Ptcd1Q8C2E4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Ptcd1Q8C2E4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC34.02■■■■□ 3.04
Ptcd1Q8C2E4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Ptcd1Q8C2E4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ptcd1Q8C2E4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Ptcd1Q8C2E4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Ptcd1Q8C2E4 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.88■■■■□ 3.01
Ptcd1Q8C2E4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
Ptcd1Q8C2E4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
Ptcd1Q8C2E4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
Ptcd1Q8C2E4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Ptcd1Q8C2E4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Ptcd1Q8C2E4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
Ptcd1Q8C2E4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Ptcd1Q8C2E4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Ptcd1Q8C2E4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Ptcd1Q8C2E4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.61■■■□□ 2.97
Ptcd1Q8C2E4 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.59■■■□□ 2.97
Ptcd1Q8C2E4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.54■■■□□ 2.96
Ptcd1Q8C2E4 Gm16148-201ENSMUST00000119653 893 ntBASIC33.52■■■□□ 2.96
Ptcd1Q8C2E4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC33.52■■■□□ 2.96
Ptcd1Q8C2E4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ptcd1Q8C2E4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Ptcd1Q8C2E4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.45■■■□□ 2.95
Ptcd1Q8C2E4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
Ptcd1Q8C2E4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Ptcd1Q8C2E4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ptcd1Q8C2E4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Ptcd1Q8C2E4 Tdp2-203ENSMUST00000223804 1136 ntBASIC33.42■■■□□ 2.94
Ptcd1Q8C2E4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ptcd1Q8C2E4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ptcd1Q8C2E4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.39■■■□□ 2.94
Ptcd1Q8C2E4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.37■■■□□ 2.93
Ptcd1Q8C2E4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Ptcd1Q8C2E4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Ptcd1Q8C2E4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC33.35■■■□□ 2.93
Ptcd1Q8C2E4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ptcd1Q8C2E4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Ptcd1Q8C2E4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.34■■■□□ 2.93
Ptcd1Q8C2E4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.3■■■□□ 2.92
Ptcd1Q8C2E4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Ptcd1Q8C2E4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.26■■■□□ 2.91
Ptcd1Q8C2E4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Ptcd1Q8C2E4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ptcd1Q8C2E4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ptcd1Q8C2E4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ptcd1Q8C2E4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Ptcd1Q8C2E4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.18■■■□□ 2.9
Ptcd1Q8C2E4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Ptcd1Q8C2E4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ptcd1Q8C2E4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Ptcd1Q8C2E4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Ptcd1Q8C2E4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33.11■■■□□ 2.89
Ptcd1Q8C2E4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ptcd1Q8C2E4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ptcd1Q8C2E4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Ptcd1Q8C2E4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
Ptcd1Q8C2E4 Peli2-204ENSMUST00000226513 1320 ntBASIC33.06■■■□□ 2.88
Ptcd1Q8C2E4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms