Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm27322-201ENSMUST00000184007 104 ntBASIC22.95■■□□□ 1.26
Chd9Q8BYH8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Chd9Q8BYH8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.87■■□□□ 1.25
Chd9Q8BYH8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chd9Q8BYH8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Chd9Q8BYH8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd9Q8BYH8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.83■■□□□ 1.25
Chd9Q8BYH8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd9Q8BYH8 Psd-208ENSMUST00000224556 2034 ntBASIC22.82■■□□□ 1.24
Chd9Q8BYH8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.8■■□□□ 1.24
Chd9Q8BYH8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chd9Q8BYH8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.76■■□□□ 1.23
Chd9Q8BYH8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chd9Q8BYH8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.7■■□□□ 1.22
Chd9Q8BYH8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd9Q8BYH8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chd9Q8BYH8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chd9Q8BYH8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd9Q8BYH8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chd9Q8BYH8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chd9Q8BYH8 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.62■■□□□ 1.21
Chd9Q8BYH8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chd9Q8BYH8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd9Q8BYH8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Chd9Q8BYH8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.47■■□□□ 1.19
Chd9Q8BYH8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Chd9Q8BYH8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.43■■□□□ 1.18
Chd9Q8BYH8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Chd9Q8BYH8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Chd9Q8BYH8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Chd9Q8BYH8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd9Q8BYH8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.4■■□□□ 1.18
Chd9Q8BYH8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Chd9Q8BYH8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.38■■□□□ 1.17
Chd9Q8BYH8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Chd9Q8BYH8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chd9Q8BYH8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Chd9Q8BYH8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.32■■□□□ 1.16
Chd9Q8BYH8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd9Q8BYH8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd9Q8BYH8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Chd9Q8BYH8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd9Q8BYH8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Chd9Q8BYH8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd9Q8BYH8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd9Q8BYH8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd9Q8BYH8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd9Q8BYH8 Gm45855-201ENSMUST00000212546 880 ntBASIC22.22■■□□□ 1.15
Chd9Q8BYH8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Chd9Q8BYH8 Gm16148-201ENSMUST00000119653 893 ntBASIC22.21■■□□□ 1.15
Chd9Q8BYH8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.21■■□□□ 1.15
Chd9Q8BYH8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Chd9Q8BYH8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chd9Q8BYH8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chd9Q8BYH8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chd9Q8BYH8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chd9Q8BYH8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Chd9Q8BYH8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.15■■□□□ 1.14
Chd9Q8BYH8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Chd9Q8BYH8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd9Q8BYH8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd9Q8BYH8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Chd9Q8BYH8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chd9Q8BYH8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chd9Q8BYH8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chd9Q8BYH8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Chd9Q8BYH8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd9Q8BYH8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chd9Q8BYH8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.03■■□□□ 1.12
Chd9Q8BYH8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Chd9Q8BYH8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd9Q8BYH8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Chd9Q8BYH8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd9Q8BYH8 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.96■■□□□ 1.11
Chd9Q8BYH8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chd9Q8BYH8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.96■■□□□ 1.11
Chd9Q8BYH8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Chd9Q8BYH8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Chd9Q8BYH8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Chd9Q8BYH8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chd9Q8BYH8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Chd9Q8BYH8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chd9Q8BYH8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.89■■□□□ 1.09
Chd9Q8BYH8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd9Q8BYH8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.88■■□□□ 1.09
Chd9Q8BYH8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chd9Q8BYH8 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.86■■□□□ 1.09
Chd9Q8BYH8 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.85■■□□□ 1.09
Chd9Q8BYH8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd9Q8BYH8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.85■■□□□ 1.09
Chd9Q8BYH8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chd9Q8BYH8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.84■■□□□ 1.09
Chd9Q8BYH8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Chd9Q8BYH8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd9Q8BYH8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd9Q8BYH8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
Chd9Q8BYH8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd9Q8BYH8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Chd9Q8BYH8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd9Q8BYH8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms