Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm8109-201ENSMUST00000194076 746 ntBASIC32.65■■■□□ 2.82
Scfd1Q8BRF7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Scfd1Q8BRF7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.64■■■□□ 2.82
Scfd1Q8BRF7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
Scfd1Q8BRF7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Scfd1Q8BRF7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Scfd1Q8BRF7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Scfd1Q8BRF7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Scfd1Q8BRF7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Scfd1Q8BRF7 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.35■■■□□ 2.77
Scfd1Q8BRF7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.35■■■□□ 2.77
Scfd1Q8BRF7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Scfd1Q8BRF7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Scfd1Q8BRF7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Scfd1Q8BRF7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Scfd1Q8BRF7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Scfd1Q8BRF7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Scfd1Q8BRF7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.23■■■□□ 2.75
Scfd1Q8BRF7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.23■■■□□ 2.75
Scfd1Q8BRF7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Scfd1Q8BRF7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
Scfd1Q8BRF7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Scfd1Q8BRF7 Gm27322-201ENSMUST00000184007 104 ntBASIC32.13■■■□□ 2.73
Scfd1Q8BRF7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Scfd1Q8BRF7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Scfd1Q8BRF7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Scfd1Q8BRF7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Scfd1Q8BRF7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Scfd1Q8BRF7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scfd1Q8BRF7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Scfd1Q8BRF7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Scfd1Q8BRF7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.83■■■□□ 2.69
Scfd1Q8BRF7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Scfd1Q8BRF7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Scfd1Q8BRF7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scfd1Q8BRF7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scfd1Q8BRF7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scfd1Q8BRF7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scfd1Q8BRF7 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.67■■■□□ 2.66
Scfd1Q8BRF7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Scfd1Q8BRF7 Gm24804-201ENSMUST00000174982 85 ntBASIC31.66■■■□□ 2.66
Scfd1Q8BRF7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Scfd1Q8BRF7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Scfd1Q8BRF7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.62■■■□□ 2.65
Scfd1Q8BRF7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.62■■■□□ 2.65
Scfd1Q8BRF7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Scfd1Q8BRF7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Scfd1Q8BRF7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Scfd1Q8BRF7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Scfd1Q8BRF7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.57■■■□□ 2.64
Scfd1Q8BRF7 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.56■■■□□ 2.64
Scfd1Q8BRF7 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.55■■■□□ 2.64
Scfd1Q8BRF7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Scfd1Q8BRF7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Scfd1Q8BRF7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scfd1Q8BRF7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Scfd1Q8BRF7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Scfd1Q8BRF7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.4■■■□□ 2.62
Scfd1Q8BRF7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.37■■■□□ 2.61
Scfd1Q8BRF7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scfd1Q8BRF7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Scfd1Q8BRF7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Scfd1Q8BRF7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scfd1Q8BRF7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scfd1Q8BRF7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scfd1Q8BRF7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Scfd1Q8BRF7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Scfd1Q8BRF7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scfd1Q8BRF7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Scfd1Q8BRF7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Scfd1Q8BRF7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Scfd1Q8BRF7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.11■■■□□ 2.57
Scfd1Q8BRF7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Scfd1Q8BRF7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Scfd1Q8BRF7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Scfd1Q8BRF7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Scfd1Q8BRF7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Scfd1Q8BRF7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Scfd1Q8BRF7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Scfd1Q8BRF7 Mipep-204ENSMUST00000225043 1548 ntBASIC31■■■□□ 2.55
Scfd1Q8BRF7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Scfd1Q8BRF7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Scfd1Q8BRF7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Scfd1Q8BRF7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Scfd1Q8BRF7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Scfd1Q8BRF7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Scfd1Q8BRF7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Scfd1Q8BRF7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Scfd1Q8BRF7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Scfd1Q8BRF7 Zfp131-205ENSMUST00000223812 663 ntBASIC30.83■■■□□ 2.53
Scfd1Q8BRF7 Peli2-204ENSMUST00000226513 1320 ntBASIC30.82■■■□□ 2.52
Scfd1Q8BRF7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Scfd1Q8BRF7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Scfd1Q8BRF7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.8■■■□□ 2.52
Scfd1Q8BRF7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scfd1Q8BRF7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scfd1Q8BRF7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Scfd1Q8BRF7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Scfd1Q8BRF7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Scfd1Q8BRF7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 576 ms