Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.16■■□□□ 1.78
SynbQ8BI41 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SynbQ8BI41 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SynbQ8BI41 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
SynbQ8BI41 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.1■■□□□ 1.77
SynbQ8BI41 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.1■■□□□ 1.77
SynbQ8BI41 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SynbQ8BI41 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SynbQ8BI41 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SynbQ8BI41 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SynbQ8BI41 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SynbQ8BI41 Gm27322-201ENSMUST00000184007 104 ntBASIC26.02■■□□□ 1.76
SynbQ8BI41 Gm24804-201ENSMUST00000174982 85 ntBASIC25.96■■□□□ 1.75
SynbQ8BI41 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SynbQ8BI41 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
SynbQ8BI41 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.92■■□□□ 1.74
SynbQ8BI41 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SynbQ8BI41 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SynbQ8BI41 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SynbQ8BI41 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.85■■□□□ 1.73
SynbQ8BI41 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SynbQ8BI41 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SynbQ8BI41 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SynbQ8BI41 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.78■■□□□ 1.72
SynbQ8BI41 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SynbQ8BI41 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SynbQ8BI41 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SynbQ8BI41 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.73■■□□□ 1.71
SynbQ8BI41 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SynbQ8BI41 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SynbQ8BI41 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.65■■□□□ 1.7
SynbQ8BI41 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SynbQ8BI41 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.6■■□□□ 1.69
SynbQ8BI41 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SynbQ8BI41 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SynbQ8BI41 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.51■■□□□ 1.67
SynbQ8BI41 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SynbQ8BI41 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SynbQ8BI41 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SynbQ8BI41 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SynbQ8BI41 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SynbQ8BI41 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
SynbQ8BI41 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SynbQ8BI41 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SynbQ8BI41 Zfp131-205ENSMUST00000223812 663 ntBASIC25.41■■□□□ 1.66
SynbQ8BI41 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SynbQ8BI41 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SynbQ8BI41 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.36■■□□□ 1.65
SynbQ8BI41 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SynbQ8BI41 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.35■■□□□ 1.65
SynbQ8BI41 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SynbQ8BI41 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SynbQ8BI41 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SynbQ8BI41 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SynbQ8BI41 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SynbQ8BI41 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SynbQ8BI41 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SynbQ8BI41 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SynbQ8BI41 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.23■■□□□ 1.63
SynbQ8BI41 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SynbQ8BI41 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SynbQ8BI41 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SynbQ8BI41 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SynbQ8BI41 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.21■■□□□ 1.63
SynbQ8BI41 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
SynbQ8BI41 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
SynbQ8BI41 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SynbQ8BI41 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.14■■□□□ 1.62
SynbQ8BI41 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SynbQ8BI41 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SynbQ8BI41 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SynbQ8BI41 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.06■■□□□ 1.6
SynbQ8BI41 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SynbQ8BI41 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SynbQ8BI41 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SynbQ8BI41 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SynbQ8BI41 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SynbQ8BI41 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SynbQ8BI41 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SynbQ8BI41 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
SynbQ8BI41 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SynbQ8BI41 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.98■■□□□ 1.59
SynbQ8BI41 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SynbQ8BI41 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SynbQ8BI41 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SynbQ8BI41 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SynbQ8BI41 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SynbQ8BI41 Gm16148-201ENSMUST00000119653 893 ntBASIC24.93■■□□□ 1.58
SynbQ8BI41 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SynbQ8BI41 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SynbQ8BI41 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SynbQ8BI41 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SynbQ8BI41 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.86■■□□□ 1.57
SynbQ8BI41 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SynbQ8BI41 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.85■■□□□ 1.57
SynbQ8BI41 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SynbQ8BI41 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SynbQ8BI41 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SynbQ8BI41 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SynbQ8BI41 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms