Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.69■■□□□ 1.22
Sox21Q811W0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.69■■□□□ 1.22
Sox21Q811W0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox21Q811W0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.59■■□□□ 1.21
Sox21Q811W0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sox21Q811W0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.58■■□□□ 1.21
Sox21Q811W0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Sox21Q811W0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox21Q811W0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sox21Q811W0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox21Q811W0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox21Q811W0 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.46■■□□□ 1.19
Sox21Q811W0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.41■■□□□ 1.18
Sox21Q811W0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox21Q811W0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox21Q811W0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Sox21Q811W0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox21Q811W0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox21Q811W0 Gm27322-201ENSMUST00000184007 104 ntBASIC22.29■■□□□ 1.16
Sox21Q811W0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox21Q811W0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox21Q811W0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox21Q811W0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.27■■□□□ 1.16
Sox21Q811W0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox21Q811W0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Sox21Q811W0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox21Q811W0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox21Q811W0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox21Q811W0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sox21Q811W0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.15■■□□□ 1.14
Sox21Q811W0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sox21Q811W0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sox21Q811W0 Gm24804-201ENSMUST00000174982 85 ntBASIC22.1■■□□□ 1.13
Sox21Q811W0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sox21Q811W0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox21Q811W0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.05■■□□□ 1.12
Sox21Q811W0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.05■■□□□ 1.12
Sox21Q811W0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox21Q811W0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sox21Q811W0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22■■□□□ 1.11
Sox21Q811W0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox21Q811W0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox21Q811W0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Sox21Q811W0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox21Q811W0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox21Q811W0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox21Q811W0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox21Q811W0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sox21Q811W0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox21Q811W0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox21Q811W0 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.91■■□□□ 1.1
Sox21Q811W0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox21Q811W0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Sox21Q811W0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox21Q811W0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Sox21Q811W0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox21Q811W0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Sox21Q811W0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox21Q811W0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.83■■□□□ 1.09
Sox21Q811W0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sox21Q811W0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox21Q811W0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox21Q811W0 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.79■■□□□ 1.08
Sox21Q811W0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox21Q811W0 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.76■■□□□ 1.07
Sox21Q811W0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sox21Q811W0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.73■■□□□ 1.07
Sox21Q811W0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sox21Q811W0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sox21Q811W0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sox21Q811W0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sox21Q811W0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sox21Q811W0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox21Q811W0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox21Q811W0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox21Q811W0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox21Q811W0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox21Q811W0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.57■■□□□ 1.04
Sox21Q811W0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox21Q811W0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Sox21Q811W0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox21Q811W0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox21Q811W0 Zfp131-205ENSMUST00000223812 663 ntBASIC21.51■■□□□ 1.03
Sox21Q811W0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox21Q811W0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox21Q811W0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Sox21Q811W0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.49■■□□□ 1.03
Sox21Q811W0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sox21Q811W0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Sox21Q811W0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox21Q811W0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox21Q811W0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sox21Q811W0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox21Q811W0 Mipep-204ENSMUST00000225043 1548 ntBASIC21.39■■□□□ 1.02
Sox21Q811W0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox21Q811W0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.35■■□□□ 1.01
Sox21Q811W0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox21Q811W0 Peli2-204ENSMUST00000226513 1320 ntBASIC21.34■■□□□ 1.01
Sox21Q811W0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sox21Q811W0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms